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Keywords

Systems Biology, Translational Bioinformatics, Complex Systems, Human Microbiome, Systems Medicine, Computational Biology

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United States

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Employment (1)

Mayo Clinic: Rochester, MN, US

Assistant Professor (Surgery)
Employment
Source: Self-asserted source
Jaeyun Sung

Works (35)

Gut Microbiome Wellness Index 2 enhances health status prediction from gut microbiome taxonomic profiles

2024-10-09 | Preprint
DOI: 10.52843/cassyni.7pgg9r
Contributors: Jaeyun Sung
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Crossref

Cerebrospinal fluid proteomic signatures are associated with symptom severity of first-episode psychosis

Journal of Psychiatric Research
2024-03 | Journal article
DOI: 10.1016/j.jpsychires.2024.02.002
Contributors: Humza Haroon; Ada Man-Choi Ho; Vinod K. Gupta; Surendra Dasari; Carl M. Sellgren; Simon Cervenka; Göran Engberg; Feride Eren; Sophie Erhardt; Jaeyun Sung et al.
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Crossref

Evaluating the prebiotic effect of oligosaccharides on gut microbiome wellness using in vitro fecal fermentation

npj Science of Food
2023-05-09 | Journal article
DOI: 10.1038/s41538-023-00195-1
Contributors: Dong Hyeon Lee; Hyunbin Seong; Daniel Chang; Vinod K. Gupta; Jiseung Kim; Seongwon Cheon; Geonhee Kim; Jaeyun Sung; Nam Soo Han
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Crossref

GMWI-webtool: a user-friendly browser application for assessing health through metagenomic gut microbiome profiling

Bioinformatics
2023-02-03 | Journal article
DOI: 10.1093/bioinformatics/btad061
Contributors: Daniel Chang; Vinod K Gupta; Benjamin Hur; Kevin Y Cunningham; Jaeyun Sung; Jonathan Wren
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Crossref

Global Transcriptomic Profiling Identifies Differential Gene Expression Signatures Between Inflammatory and Noninflammatory Aortic Aneurysms

Arthritis & Rheumatology
2022-08 | Journal article
DOI: 10.1002/art.42138
Contributors: Benjamin Hur; Matthew J. Koster; Jin Sung Jang; Cornelia M. Weyand; Kenneth J. Warrington; Jaeyun Sung
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Crossref

GMHI-webtool: a user-friendly browser application for assessing health through metagenomic gut microbiome profiling

2022-07-04 | Preprint
DOI: 10.1101/2022.06.30.498296
Contributors: Daniel Chang; Vinod K. Gupta; Benjamin Hur; Kevin Y. Cunningham; Jaeyun Sung
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Crossref

Multi-omics reveals microbiome, host gene expression, and immune landscape in gastric carcinogenesis

iScience
2022-03 | Journal article
DOI: 10.1016/j.isci.2022.103956
Contributors: Chan Hyuk Park; Changjin Hong; A-reum Lee; Jaeyun Sung; Tae Hyun Hwang
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Crossref

Resource-allocation constraint governs structure and function of microbial communities in metabolic modeling

Metabolic Engineering
2022-03 | Journal article
DOI: 10.1016/j.ymben.2021.12.011
Contributors: Minsuk Kim; Jaeyun Sung; Nicholas Chia
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Crossref

Gut microbial determinants of clinically important improvement in patients with rheumatoid arthritis

Genome Medicine
2021-12 | Journal article
DOI: 10.1186/s13073-021-00957-0
Contributors: Vinod K. Gupta; Kevin Y. Cunningham; Benjamin Hur; Utpal Bakshi; Harvey Huang; Kenneth J. Warrington; Veena Taneja; Elena Myasoedova; John M. Davis, III; Jaeyun Sung
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Crossref

Plasma metabolomic profiling in patients with rheumatoid arthritis identifies biochemical features predictive of quantitative disease activity

Arthritis Research & Therapy
2021-12 | Journal article
DOI: 10.1186/s13075-021-02537-4
Contributors: Benjamin Hur; Vinod K. Gupta; Harvey Huang; Kerry A. Wright; Kenneth J. Warrington; Veena Taneja; John M. Davis, III; Jaeyun Sung
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Crossref

TaxiBGC: a Taxonomy-guided Approach for Profiling Experimentally Characterized Microbial Biosynthetic Gene Clusters and Secondary Metabolite Production Potential in Metagenomes

2021-08-02 | Preprint
DOI: 10.1101/2021.07.30.454505
Contributors: Vinod K. Gupta; Utpal Bakshi; Daniel Chang; Aileen R. Lee; John M. Davis, III; Sriram Chandrasekaran; Yong-Su Jin; Michael F. Freeman; Jaeyun Sung
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Crossref

Maternal obesity is associated with phenotypic alterations in fetal immune cells by single‐cell mass cytometry

American Journal of Reproductive Immunology
2021-03 | Journal article
DOI: 10.1111/aji.13358
Contributors: Elizabeth Ann L. Enninga; Jin Sung Jang; Benjamin Hur; Erica L. Johnson; Myra J. Wick; Jaeyun Sung; Rana Chakraborty
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Crossref

Gut Microbiome Predicts Clinically Important Improvement in Patients with Rheumatoid Arthritis

2021-01-04 | Other
DOI: 10.1101/2020.12.30.20249040
Contributors: Vinod K. Gupta; Kevin Y. Cunningham; Utpal Bakshi; Benjamin Hur; Harvey Huang; Kenneth J. Warrington; Veena Taneja; Elena Myasoedova; John M. Davis, III; Jaeyun Sung
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Crossref

A predictive index for health status using species-level gut microbiome profiling

Nature Communications
2020-09-15 | Journal article
DOI: 10.1038/s41467-020-18476-8
Contributors: Vinod K. Gupta; Minsuk Kim; Utpal Bakshi; Kevin Y. Cunningham; John M. Davis, III; Konstantinos N. Lazaridis; Heidi Nelson; Nicholas Chia; Jaeyun Sung
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Crossref

Plasma Metabolomic Profiling in Patients with Rheumatoid Arthritis Identifies Biochemical Features Predictive of Quantitative Disease Activity

2020-09-14 | Other
DOI: 10.1101/2020.09.13.20193664
Contributors: Benjamin Hur; Vinod K. Gupta; Harvey Huang; Kerry A. Wright; Kenneth J. Warrington; Veena Taneja; John M. Davis, III; Jaeyun Sung
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Crossref

Single-cell mass cytometry on peripheral blood identifies immune cell subsets associated with primary biliary cholangitis.

Scientific reports
2020-07-28 | Journal article
DOI: 10.1038/s41598-020-69358-4
PMID: 32724082
PMC: PMC7387528
Source: Self-asserted source
Jaeyun Sung

Large-scale metabolic interaction network of the mouse and human gut microbiota.

Scientific data
2020-06-26 | Journal article
DOI: 10.1038/s41597-020-0516-5
PMID: 32591517
PMC: PMC7320173
Source: Self-asserted source
Jaeyun Sung

Fecal Metabolomic Signatures in Colorectal Adenoma Patients Are Associated with Gut Microbiota and Early Events of Colorectal Cancer Pathogenesis.

mBio
2020-02 | Journal article
DOI: 10.1128/mbio.03186-19
PMID: 32071266
Contributors: Kim M; Vogtmann E; Ahlquist DA; Devens ME; Kisiel JB; Taylor WR; White BA; Hale VL; Sung J; Chia N et al.
Source: Self-asserted source
Jaeyun Sung via Europe PubMed Central

A Novel Index for Predicting Health Status Using Species-level Gut Microbiome Profiling

2020-02-25 | Preprint
DOI: 10.1101/2020.02.24.962100
Contributors: Vinod K. Gupta; Minsuk Kim; Utpal Bakshi; Kevin Y. Cunningham; John M. Davis, III; Konstantinos N. Lazaridis; Heidi Nelson; Nicholas Chia; Jaeyun Sung
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Crossref

Single-Cell Mass Cytometry on Peripheral Blood Identifies Immune Cell Subsets Associated with Primary Biliary Cholangitis

2020-02-25 | Preprint
DOI: 10.1101/2020.02.24.962043
Contributors: Jin Sung Jang; Brian Juran; Kevin Y. Cunningham; Vinod K. Gupta; YoungMin Son; Ju Dong Yang; Ahmad H. Ali; Elizabeth Ann L. Enninga; Jaeyun Sung; Konstantinos N. Lazaridis
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Crossref

Postmenopause as a key factor in the composition of the Endometrial Cancer Microbiome (ECbiome).

Scientific reports
2019-12 | Journal article
DOI: 10.1038/s41598-019-55720-8
PMID: 31844128
PMC: PMC6915778
Contributors: Walsh DM; Hokenstad AN; Chen J; Sung J; Jenkins GD; Chia N; Nelson H; Mariani A; Walther-Antonio MRS
Source: Self-asserted source
Jaeyun Sung via Europe PubMed Central

Distinct microbes, metabolites, and ecologies define the microbiome in deficient and proficient mismatch repair colorectal cancers.

Genome medicine
2018-10 | Journal article
DOI: 10.1186/s13073-018-0586-6
PMID: 30376889
PMC: PMC6208080
Contributors: Hale VL; Jeraldo P; Chen J; Mundy M; Yao J; Priya S; Keeney G; Lyke K; Ridlon J; White BA et al.
Source: Self-asserted source
Jaeyun Sung via Europe PubMed Central

Metabolomic Profiling of Portal Blood and Bile Reveals Metabolic Signatures of Primary Sclerosing Cholangitis.

International journal of molecular sciences
2018-10 | Journal article
DOI: 10.3390/ijms19103188
PMID: 30332763
PMC: PMC6214107
Contributors: Tietz-Bogert PS; Kim M; Cheung A; Tabibian JH; Heimbach JK; Rosen CB; Nandakumar M; Lazaridis KN; LaRusso NF; Sung J et al.
Source: Self-asserted source
Jaeyun Sung via Europe PubMed Central

Strain Tracking Reveals the Determinants of Bacterial Engraftment in the Human Gut Following Fecal Microbiota Transplantation.

Cell host & microbe
2018-02 | Journal article
DOI: 10.1016/j.chom.2018.01.003
PMID: 29447696
Contributors: Smillie CS; Sauk J; Gevers D; Friedman J; Sung J; Youngster I; Hohmann EL; Staley C; Khoruts A; Sadowsky MJ et al.
Source: Self-asserted source
Jaeyun Sung via Europe PubMed Central

Global metabolic interaction network of the human gut microbiota for context-specific community-scale analysis.

Nature communications
2017-06 | Journal article
DOI: 10.1038/ncomms15393
PMID: 28585563
PMC: PMC5467172
Contributors: Sung J; Kim S; Cabatbat JJT; Jang S; Jin YS; Jung GY; Chia N; Kim PJ
Source: Self-asserted source
Jaeyun Sung via Europe PubMed Central

Fumarate-Mediated Persistence of Escherichia coli against Antibiotics.

Antimicrobial agents and chemotherapy
2016-03 | Journal article
DOI: 10.1128/AAC.01794-15
PMID: 26810657
PMC: PMC4808198
Contributors: Kim JS; Cho DH; Heo P; Jung SC; Park M; Oh EJ; Sung J; Kim PJ; Lee SC; Lee DH et al.
Source: Self-asserted source
Jaeyun Sung via Europe PubMed Central

Metabolic modeling with Big Data and the gut microbiome.

Applied & translational genomics
2016-02 | Journal article
DOI: 10.1016/j.atg.2016.02.001
PMID: 27668170
PMC: PMC5025471
Contributors: Sung J; Hale V; Merkel AC; Kim PJ; Chia N
Source: Self-asserted source
Jaeyun Sung via Europe PubMed Central

Uncovering the nutritional landscape of food.

PloS one
2015-03 | Journal article
DOI: 10.1371/journal.pone.0118697
PMID: 25768022
PMC: PMC4359127
Contributors: Kim S; Sung J; Foo M; Jin YS; Kim PJ
Source: Self-asserted source
Jaeyun Sung via Europe PubMed Central

Measuring the effect of inter-study variability on estimating prediction error.

PloS one
2014-10 | Journal article
DOI: 10.1371/journal.pone.0110840
PMID: 25330348
PMC: PMC4201588
Contributors: Ma S; Sung J; Magis AT; Wang Y; Geman D; Price ND
Source: Self-asserted source
Jaeyun Sung via Europe PubMed Central

Systems approach to neurodegenerative disease biomarker discovery.

Annual review of pharmacology and toxicology
2013-10 | Journal article
DOI: 10.1146/annurev-pharmtox-011613-135928
PMID: 24160693
Contributors: Lausted C; Lee I; Zhou Y; Qin S; Sung J; Price ND; Hood L; Wang K
Source: Self-asserted source
Jaeyun Sung via Europe PubMed Central

Multi-study integration of brain cancer transcriptomes reveals organ-level molecular signatures.

PLoS computational biology
2013-07 | Journal article
DOI: 10.1371/journal.pcbi.1003148
PMID: 23935471
PMC: PMC3723500
Contributors: Sung J; Kim PJ; Ma S; Funk CC; Magis AT; Wang Y; Hood L; Geman D; Price ND
Source: Self-asserted source
Jaeyun Sung via Europe PubMed Central

Molecular signatures from omics data: from chaos to consensus.

Biotechnology journal
2012-04 | Journal article
DOI: 10.1002/biot.201100305
PMID: 22528809
PMC: PMC3418428
Contributors: Sung J; Wang Y; Chandrasekaran S; Witten DM; Price ND
Source: Self-asserted source
Jaeyun Sung via Europe PubMed Central

The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models.

Nature biotechnology
2010-07 | Journal article
DOI: 10.1038/nbt.1665
PMID: 20676074
PMC: PMC3315840
Contributors: Shi L; Campbell G; Jones WD; Campagne F; Wen Z; Walker SJ; Su Z; Chu TM; Goodsaid FM; Pusztai L et al.
Source: Self-asserted source
Jaeyun Sung via Europe PubMed Central

Relative expression analysis for molecular cancer diagnosis and prognosis.

Technology in cancer research & treatment
2010-04 | Journal article
DOI: 10.1177/153303461000900204
PMID: 20218737
PMC: PMC2921829
Contributors: Eddy JA; Sung J; Geman D; Price ND
Source: Self-asserted source
Jaeyun Sung via Europe PubMed Central

Sequential delivery of dexamethasone and VEGF to control local tissue response for carbon nanotube fluorescence based micro-capillary implantable sensors.

Biomaterials
2008-11 | Journal article
DOI: 10.1016/j.biomaterials.2008.09.052
PMID: 18996588
Contributors: Sung J; Barone PW; Kong H; Strano MS
Source: Self-asserted source
Jaeyun Sung via Europe PubMed Central
How many people are using ORCID?