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Activities

Employment (5)

Zhejiang University: Hangzhou, CN

2023-09-13 to present | Principle Investigator (PI), Associate Professor (Zhejiang University - University of Edinburgh Joint Institute (ZJE))
Employment
Source: Self-asserted source
Ying Chi

Base & Byte Bio-technology Ltd Co.: Beijing, CN

2022-04-25 to 2023-08-25 | Chief Executive Officer (CEO), Chief Technology Officer (CTO), & Co-Founder (Artificial Intelligence, Bio-informatics, & software engineering)
Employment
Source: Self-asserted source
Ying Chi

Alibaba DAMO Academy: Hangzhou, Zhejiang, CN

2018-06-14 to 2022-04-24 | Founding Director & Premier Technology Expert (Drug Discovery Intelligence & Healthcare Intelligence)
Employment
Source: Self-asserted source
Ying Chi

Siemens Healthineers: Beijing, DE

2016-06 to 2018-06 | Head / Director of China Region (Artificial Intelligence )
Employment
Source: Self-asserted source
Ying Chi

Siemens Healthineers: Beijing, DE

2010 to 2016 | Expert Research Scientist (Artificial Intelligence)
Employment
Source: Self-asserted source
Ying Chi

Education and qualifications (4)

University of Oxford: Oxford, GB

2008-09 to 2010-10 | Postdoctoral researcher (Biomedical Engineering)
Education
Source: Self-asserted source
Ying Chi

Imperial College London: London, London, GB

2005-10 to 2008-08 | PhD (Bioengineering)
Education
Source: Self-asserted source
Ying Chi

University of Bristol: Bristol, GB

2002-09 to 2004-02 | Master of Science (Advanced Computing)
Education
Source: Self-asserted source
Ying Chi

Beihang University: Beijing, CN

1995-09 to 1999-07 | Bachelor of Engineering (Management Information System)
Education
Source: Self-asserted source
Ying Chi

Professional activities (12)

Zhejiang University: Hangzhou, Zhejiang, CN

PhD supervisor (College of Pharmaceutical Sciences)
Invited position
Source: Self-asserted source
Ying Chi

Nanyang Technological University: Singapore, SG

PhD supervisor (School of Computer Engineering)
Invited position
Source: Self-asserted source
Ying Chi

Ministry of Science and Technology: Beijing, CN

Expert in writing up the guidelines for the 14th Five-Year Plan Biotechnology and Information Technology Integration Fund of the Ministry of Science and Technology of the People's Republic of China (The 14th Five-Year Plan Biotechnology and Information Technology Integration Fund)
Invited position
Source: Self-asserted source
Ying Chi

IEEE: New York, NY, US

2021 to present | Senior Member, Member/Customer Number: 96815649
Membership
Source: Self-asserted source
Ying Chi

ACM International: Florissant, MO, US

2020-06-01 to present | Membership No.: 3777488
Membership
Source: Self-asserted source
Ying Chi

ACM International: Florissant, MO, US

2020-05 to present | Local Chair / online Chair (ACMMM2020 (multimedia))
Invited position
Source: Self-asserted source
Ying Chi

State Key Laboratory of CAD and CG: Hangzhou, Zhejiang, CN

2020 to 2022 | team leader (Alibaba Group Researcher Team)
Membership
Source: Self-asserted source
Ying Chi

ACM International: Florissant, MO, US

2020 to 2020 | Local/online Chair (ACM Multi-media 2020 International Conference Organization Committee)
Membership
Source: Self-asserted source
Ying Chi

The IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR): New York, US

2019 to 2020 | reviewer & member (reviewer group)
Membership
Source: Self-asserted source
Ying Chi

Medical Image Computing and Computer Assisted Intervention (MICCAI): New York, US

2007 to 2020 | reviewer & member (reviewer group)
Membership
Source: Self-asserted source
Ying Chi

SIMILAR Network of Excellence: Europe, Europe, GB

2005-10 to 2008-10 | PhD research student member
Membership
Source: Self-asserted source
Ying Chi

International Society for Magnetic Resonance in Medicine: Concord, CA, US

2007 to 2008 | Student Member
Membership
Source: Self-asserted source
Ying Chi

Funding (2)

Research and Application Demonstration of Blockchain-based Active Health Intelligent Care Platform for the Elderly

2020 to 2023 | Grant
Ministry of Science and Technology of the People's Republic of China (Beijing, CN)
GRANT_NUMBER:

Project application number is YS2020YFC200032, the project number is 2020YFC2008700

Source: Self-asserted source
Ying Chi

United Kingdom Grant Code "DFRNFR2":Ultrasound-measured In-vivo Soft Tissue Biomechanics - Ultrasound Elastography

Grant
BP (United Kingdom) (London, GB)
GRANT_NUMBER:

DFRNFR2

Source: Self-asserted source
Ying Chi

Works (50 of 78)

Items per page:
Page 1 of 2

Hormone correction of dysfunctional metabolic gene expression in stem cell-derived liver tissue

Stem Cell Research & Therapy
2025-02-11 | Journal article
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

CovEpiAb: a comprehensive database and analysis resource for immune epitopes and antibodies of human coronaviruses

Briefings in Bioinformatics
2024-03-27 | Journal article
Part of ISSN: 1467-5463
Part of ISSN: 1477-4054
Contributors: Xue Zhang; JingCheng Wu; Yuanyuan Luo; Yilin Wang; Yujie Wu; Xiaobin Xu; Yufang Zhang; Ruiying Kong; Ying Chi; Yisheng Sun et al.
Source: Self-asserted source
Ying Chi

Reconstruction of the cell pseudo-space from single-cell RNA sequencing data with scSpace

Nature Communications
2023-04-29 | Journal article | Author
Part of ISSN: 2041-1723
Contributors: Jingyang Qian; Jie Liao; Ziqi Liu; Ying Chi; Yin FANG; Yanrong Zheng; Xin Shao; Bingqi Liu; Yongjin Cui; Wenbo Guo et al.
Source: Self-asserted source
Ying Chi

CN113449755B: Data processing method, model training method, device, equipment and storage medium

China Patent Organization
2022-12-02 | Patent
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

TSNAdb v2. 0: the updated version of tumor-specific neoantigen database

Genomics, Proteomics & Bioinformatics
2022-10-06 | Journal article
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

CN112668710B: Model training, tubular object extraction and data recognition method and equipment

China Patent Organization
2022-08-05 | Patent
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

CN111784700B: Lung lobe segmentation, model training, model construction and segmentation method, system and equipment

China Patent Organization
2022-07-22 | Patent
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

CN111898622B: Information processing method, information display method, model training method, information display system, model training system and equipment

China Patent Organization
2022-07-15 | Patent
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

CN113469172B: Target positioning method, model training method, interface interaction method and equipment

China Patent Organization
2022-07-01 | Patent
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

LU500798B1: Full-Automatic Segmentation Method for Coronary Artery Calcium Lesions Based on Non-Contrast Chest CT

Luxembourg Patent Organization
2022-06-10 | Patent
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Multiphysical graph neural network (MP-GNN) for COVID-19 drug design

Briefings in Bioinformatics
2022-05 | Journal article
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Reconstruction of the cell pseudo-space from single-cell RNA sequencing data with scSpace

2022-05-08 | Preprint
Contributors: Jie Liao; Jingyang Qian; Ziqi Liu; Ying Chi; Yanrong Zheng; Xin Shao; Junyun Cheng; Yongjin Cui; Wenbo Guo; Penghui Yang et al.
Source: Self-asserted source
Ying Chi

US11263501B2: Generating reports of three dimensional images

US Patent Organization
2022-03 | Patent
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

US17366480: Processing method, model training method, means, and storage medium for spinal images

US Patent Organization
2022-03-17 | Patent
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Molecular persistent spectral image (Mol-PSI) representation for machine learning models in drug design

Briefings in Bioinformatics
2022-01 | Journal article
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

\ alpha-IoU: A Family of Power Intersection over Union Losses for Bounding Box Regression

Advances in Neural Information Processing Systems (NeurIPS)
2021 | Conference paper
URI:

https://proceedings.neurips.cc/paper/2021/file/a8f15eda80c50adb0e71943adc8015cf-Paper.pdf

Contributors: HE, JIABO; Erfani, Sarah; Ma, Xingjun; Bailey, James; Chi, Ying; Hua, Xian-Sheng; M. Ranzato; A. Beygelzimer; Y. Dauphin; P.S. Liang et al.
Source: Self-asserted source
Ying Chi

Conditional Training with Bounding Map for Universal Lesion Detection

Medical Image Computing and Computer Assisted Intervention – MICCAI 2021
2021 | Book chapter
Part of ISBN: 9783030872397
Part of ISBN: 9783030872403
Part of ISSN: 0302-9743
Part of ISSN: 1611-3349
Contributors: Han Li; Long Chen; Hu Han; Ying Chi; S. Kevin Zhou
Source: Self-asserted source
Ying Chi

TSNAD v2.0: A one-stop software solution for tumor-specific neoantigen detection

Computational and Structural Biotechnology Journal
2021 | Journal article
Part of ISSN: 2001-0370
Contributors: Zhan Zhou; Jingcheng Wu; Jianan; Wenfan Chen; Wenyi Zhao; Xun Gu; Ying Chi; Qiaojun He; Bo Yang; Jian Wu et al.
Source: Self-asserted source
Ying Chi

A novel genomic classification system of gastric cancer via integrating multidimensional genomic characteristics

Gastric Cancer
2021-11 | Journal article
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

CN112288752B: Full-automatic coronary calcified focus segmentation method based on chest flat scan CT

China Patent Organization
2021-10-28 | Patent
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Application of Machine Learning in Flight Safety Event Reasoning

IEEE 3rd International Conference on Civil Aviation Safety and Information Technology (ICCASIT)
2021-10-20 | Conference paper
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Conditional training with bounding map for universal lesion detection

Medical Image Computing and Computer Assisted Intervention (MICCAI)
2021-09-27 | Conference paper
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Towards parkinson’s disease prognosis using self-supervised learning and anomaly detection

IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP)
2021-06-06 | Conference paper
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Towards Parkinson’s Disease Prognosis Using Self-Supervised Learning and Anomaly Detection

ICASSP 2021 - 2021 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP)
2021-06-06 | Conference paper
Contributors: Hongchao Jiang; Wei Yang Bryan Lim; Jer Shyuan Ng; Yu Wang; Ying Chi; Chunyan Miao
Source: Self-asserted source
Ying Chi

Application of Situation Awareness and Bow-tie Method in Flight Safety Event Reasoning

International Conference on Artificial Intelligence and Information Systems
2021-05-28 | Conference paper
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Mobile-based Clock Drawing Test for Detecting Early Signs of Dementia

the AAAI Conference on Artificial Intelligence(AAAI)
2021-05-18 | Conference paper
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

CN107045638B: Flight safety event analysis method based on situational awareness model

China Patent Organization
2021-03-30 | Patent
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

US16922131: Method and apparatus for generating image reports

US Patent Organization
2021-02-25 | Patent
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

US16929365:Data processing method, apparatus, and device

US Patent Organization
2021-02-25 | Patent
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Development and validation of a practical instrument for evaluating players’ familiarity with exergames

International journal of human-computer studies
2021-01-01 | Journal article
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Training liver vessel segmentation deep neural networks on noisy labels from contrast CT imaging

IEEE International Symposium on Biomedical Imaging (ISBI)
2020 | Conference paper
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Cpr-gcn: Conditional partial-residual graph convolutional network in automated anatomical labeling of coronary arteries

The IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR)
2020 | Conference paper
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Landmarks detection with anatomical constraints for total hip arthroplasty preoperative measurements

Medical Image Computing and Computer Assisted Intervention (MICCAI)
2020 | Conference paper
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

基于大规模临床数据深度学习的口腔疾病人工智能预防与诊断平台的构建

精准医学杂志
2020-12-25 | Journal article
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

CN106651220B: Pilot operation quality evaluation method based on curve fitting

China Patent Organization
2020-11-17 | Patent
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Weakly supervised organ localization with attention maps regularized by local area reconstruction

Medical Image Computing and Computer Assisted Intervention (MICCAI)
2020-10 | Conference paper
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

CN106127407B: Airplane travel scoring method and system based on multi-sensor information fusion

China Patent Organization
2020-10-09 | Patent
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

US16839886: Method, system, and device for lung lobe segmentation, model training, model construction and segmentation

US Patent Organization
2020-10-08 | Patent
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Optimizing Filter-bank Canonical Correlation Analysis for fast response SSVEP Brain-Computer Interface (BCI)

2020 International Joint Conference on Neural Networks (IJCNN)
2020-07 | Conference paper
Contributors: Aung Aung Phyo Wai; Heng Guo; Ying Chi; Lei Zhang; Xian-Sheng Hua; Cuntai Guan
Source: Self-asserted source
Ying Chi

Optimizing filter-bank canonical correlation analysis for fast response SSVEP brain-computer interface (BCI)

IEEE International Joint Conference on Neural Networks (IJCNN)
2020-07-19 | Conference paper
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Explainable and Argumentation-based Decision Making with Qualitative Preferences for Diagnostics and Prognostics of Alzheimer's Disease

the International Conference on Principles of Knowledge Representation and Reasoning
2020-07-09 | Conference paper
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Explainable and Contextual Preferences based Decision Making with Assumption-based Argumentation for Diagnostics and Prognostics of Alzheimer's Disease

International Conference on Autonomous Agents and MultiAgent Systems
2020-05-05 | Conference paper
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

US10607342B2:Atlas-based contouring of organs at risk for radiation therapy

US Patent Organization
2020-03-31 | Patent
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Towards a Fast Steady-State Visual Evoked Potentials (SSVEP) Brain-Computer Interface (BCI)

arXiv: 2002.01171
2020-02 | Conference paper
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Towards a fast steady-state visual evoked potentials (SSVEP) brain-computer interface (BCI)

arXiv preprint arXiv:2002.01171
2020-02-04 | Journal article
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Automated segmentation of pulmonary lobes using coordination-guided deep neural networks

IEEE International Symposium on Biomedical Imaging (ISBI)
2019 | Conference paper
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Concept Detection based on Multi-label Classification and Image Captioning Approach-DAMO at ImageCLEF 2019

ImageCLEF
2019 | Conference paper
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Discriminative coronary artery tracking via 3D CNN in cardiac CT angiography

Medical Image Computing and Computer Assisted Intervention (MICCAI)
2019 | Conference paper
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Home-based Self-assessments and Early Risk Analytics for Parkinson’s Disease

International Journal of Information Technology
2019 | Journal article
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi

Learned full-sampling reconstruction

Medical Image Computing and Computer Assisted Intervention (MICCAI)
2019 | Conference paper
Contributors: Ying Chi
Source: Self-asserted source
Ying Chi
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