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Scopus Author ID: 54787745700

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Employment (1)

INRAE: Jouy-en-Josas, FR

2023-03-01 to present | Research Scientist
Employment
Source: Self-asserted source
Zehra Esra Ilhan

Education and qualifications (2)

Arizona State University: Tempe, AZ, US

2010 to 2016 | Ph.D. (School of Life Sciences)
Education
Source: Self-asserted source
Zehra Esra Ilhan

Iowa State University: Ames, Iowa, US

2008-08 to 2010-05 | M.S. (Department of Civil, Construction, and Environmental Engineering)
Education
Source: Self-asserted source
Zehra Esra Ilhan

Professional activities (1)

International Society for Microbial Ecology: Wageningen, NL

Membership
Source: Self-asserted source
Zehra Esra Ilhan

Works (29)

Organic carbon metabolism is a main determinant of hydrogen demand and dynamics in anaerobic soils.

Chemosphere
2022-05 | Journal article
DOI: 10.1016/j.chemosphere.2022.134877
PMID: 35577129
Contributors: Meinel M; Delgado AG; Ilhan ZE; Aguero ML; Aguiar S; Krajmalnik-Brown R; Torres CI
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Exposure to anti-seizure medications impact growth of gut bacterial species and subsequent host response.

Neurobiology of disease
2022-02 | Journal article
DOI: 10.1016/j.nbd.2022.105664
PMID: 35183703
Contributors: Ilhan ZE; Brochard V; Lapaque N; Auvin S; Lepage P
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Surgical Menopause and Estrogen Therapy Modulate the Gut Microbiota, Obesity Markers, and Spatial Memory in Rats.

Frontiers in cellular and infection microbiology
2021-09 | Journal article
DOI: 10.3389/fcimb.2021.702628
PMID: 34660336
PMC: PMC8515187
Contributors: Zeibich L; Koebele SV; Bernaud VE; Ilhan ZE; Dirks B; Northup-Smith SN; Neeley R; Maldonado J; Nirmalkar K; Files JA et al.
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Members of prevotella genus distinctively modulate innate immune and barrier functions in a human three-dimensional endometrial epithelial cell model

Journal of Infectious Diseases
2020 | Journal article
DOI: 10.1093/infdis/jiaa324
EID:

2-s2.0-85096152360

Part of ISSN: 15376613 00221899
Contributors: Ilhan, Z.E.; Łaniewski, P.; Tonachio, A.; Herbst-Kralovetz, M.M.
Source: Self-asserted source
Zehra Esra Ilhan via Scopus - Elsevier

MicroNiche: An R package for assessing microbial niche breadth and overlap from amplicon sequencing data

FEMS Microbiology Ecology
2020 | Journal article
DOI: 10.1093/femsec/fiaa131
EID:

2-s2.0-85088180045

Part of ISSN: 15746941 01686496
Contributors: Finn, D.R.; Yu, J.; Ilhan, Z.E.; Fernandes, V.M.C.; Penton, C.R.; Krajmalnik-Brown, R.; Garcia-Pichel, F.; Vogel, T.M.
Source: Self-asserted source
Zehra Esra Ilhan via Scopus - Elsevier

The microbiome and gynaecological cancer development, prevention and therapy

Nature Reviews Urology
2020 | Journal article
DOI: 10.1038/s41585-020-0286-z
EID:

2-s2.0-85079765988

Part of ISSN: 17594820 17594812
Contributors: Łaniewski, P.; Ilhan, Z.E.; Herbst-Kralovetz, M.M.
Source: Self-asserted source
Zehra Esra Ilhan via Scopus - Elsevier

Increased expression of antibiotic-resistance genes in biofilm communities upon exposure to cetyltrimethylammonium bromide (CTAB) and other stress conditions.

The Science of the total environment
2020-12 | Journal article
DOI: 10.1016/j.scitotenv.2020.144264
PMID: 33418325
Contributors: Luo YH; Lai YS; Zheng C; Ilhan ZE; Ontiveros-Valencia A; Long X; Krajmalnik-Brown R; Rittmann BE
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Temporospatial shifts in the human gut microbiome and metabolome after gastric bypass surgery

npj Biofilms and Microbiomes
2020-12 | Journal article
DOI: 10.1038/s41522-020-0122-5
Contributors: Zehra Esra Ilhan; John K. DiBaise; Sydney E. Dautel; Nancy G. Isern; Young-Mo Kim; David W. Hoyt; Athena A. Schepmoes; Heather M. Brewer; Karl K. Weitz; Thomas O. Metz et al.
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Crossref
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Integrative and quantitative bioenergetics: Design of a study to assess the impact of the gut microbiome on host energy balance

Contemporary Clinical Trials Communications
2020-09 | Journal article
DOI: 10.1016/j.conctc.2020.100646
Part of ISSN: 2451-8654
Source: Self-asserted source
Zehra Esra Ilhan
grade
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Deciphering the complex interplay between microbiota, HPV, inflammation and cancer through cervicovaginal metabolic profiling.

EBioMedicine
2019-04 | Journal article
DOI: 10.1016/j.ebiom.2019.04.028
PMID: 31027917
PMC: PMC6604110
Contributors: Ilhan ZE; Łaniewski P; Thomas N; Roe DJ; Chase DM; Herbst-Kralovetz MM
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Complete dechlorination and mineralization of pentachlorophenol (PCP) in a hydrogen-based membrane biofilm reactor (MBfR).

Water research
2018-07 | Journal article
DOI: 10.1016/j.watres.2018.06.071
PMID: 30025265
Contributors: Long M; Ilhan ZE; Xia S; Zhou C; Rittmann BE
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Lactobacillus acidophilus disrupts collaborative multispecies bile acid metabolism

2018-04 | Other
DOI: 10.1101/296020
OTHER-ID:

PPR14726
Contributors: Dautel S; Khan N; Brandvold KR; Brislawn CJ; Hutchison J; Weitz KK; Heyman HM; Song H; Ilhan ZE; Hill EA et al.
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Microbiota-drug interactions: Impact on metabolism and efficacy of therapeutics.

Maturitas
2018-04 | Journal article
DOI: 10.1016/j.maturitas.2018.03.012
PMID: 29704918
Contributors: Wilkinson EM; Ilhan ZE; Herbst-Kralovetz MM
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Differences in fecal microbial metabolites and microbiota of children with autism spectrum disorders.

Anaerobe
2017-12 | Journal article
DOI: 10.1016/j.anaerobe.2017.12.007
PMID: 29274915
Contributors: Kang DW; Ilhan ZE; Isern NG; Hoyt DW; Howsmon DP; Shaffer M; Lozupone CA; Hahn J; Adams JB; Krajmalnik-Brown R
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Total electron acceptor loading and composition affect hexavalent uranium reduction and microbial community structure in a membrane biofilm reactor.

Water research
2017-08 | Journal article
DOI: 10.1016/j.watres.2017.08.060
PMID: 28881210
Contributors: Ontiveros-Valencia A; Zhou C; Ilhan ZE; de Saint Cyr LC; Krajmalnik-Brown R; Rittmann BE
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Enhancing biodegradation of C16-alkyl quaternary ammonium compounds using an oxygen-based membrane biofilm reactor.

Water research
2017-07 | Journal article
DOI: 10.1016/j.watres.2017.07.003
PMID: 28797964
Contributors: Lai YS; Ontiveros-Valencia A; Ilhan ZE; Zhou Y; Miranda E; Maldonado J; Krajmalnik-Brown R; Rittmann BE
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Insights into Butyrate Production in a Controlled Fermentation System via Gene Predictions.

mSystems
2017-07 | Journal article
DOI: 10.1128/mSystems.00051-17
PMID: 28761933
PMC: PMC5516221
Contributors: Esquivel-Elizondo S; Ilhan ZE; Garcia-Peña EI; Krajmalnik-Brown R
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Distinctive microbiomes and metabolites linked with weight loss after gastric bypass, but not gastric banding.

The ISME journal
2017-05 | Journal article
DOI: 10.1038/ismej.2017.71
PMID: 28548658
PMC: PMC5563958
Contributors: Ilhan ZE; DiBaise JK; Isern NG; Hoyt DW; Marcus AK; Kang DW; Crowell MD; Rittmann BE; Krajmalnik-Brown R
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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pH-Mediated Microbial and Metabolic Interactions in Fecal Enrichment Cultures.

mSphere
2017-05 | Journal article
DOI: 10.1128/mSphere.00047-17
PMID: 28497116
PMC: PMC5415631
Contributors: Ilhan ZE; Marcus AK; Kang DW; Rittmann BE; Krajmalnik-Brown R
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson's Disease.

Cell
2016-12 | Journal article
DOI: 10.1016/j.cell.2016.11.018
PMID: 27912057
PMC: PMC5718049
Contributors: Sampson TR; Debelius JW; Thron T; Janssen S; Shastri GG; Ilhan ZE; Challis C; Schretter CE; Rocha S; Gradinaru V et al.
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Gut microbial and short-chain fatty acid profiles in adults with chronic constipation before and after treatment with lubiprostone.

Anaerobe
2015-01 | Journal article
DOI: 10.1016/j.anaerobe.2015.01.005
PMID: 25617726
Contributors: Kang DW; DiBaise JK; Ilhan ZE; Crowell MD; Rideout JR; Caporaso JG; Rittmann BE; Krajmalnik-Brown R
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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The source of inoculum plays a defining role in the development of MEC microbial consortia fed with acetic and propionic acid mixtures.

Journal of biotechnology
2014-05 | Journal article
DOI: 10.1016/j.jbiotec.2014.04.016
PMID: 24798298
Contributors: Ruiz V; Ilhan ZE; Kang DW; Krajmalnik-Brown R; Buitrón G
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Preferred source (of 2)‎

Reduced incidence of Prevotella and other fermenters in intestinal microflora of autistic children.

PloS one
2013-07 | Journal article
DOI: 10.1371/journal.pone.0068322
PMID: 23844187
PMC: PMC3700858
Contributors: Kang DW; Park JG; Ilhan ZE; Wallstrom G; Labaer J; Adams JB; Krajmalnik-Brown R
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Effects of multiple electron acceptors on microbial interactions in a hydrogen-based biofilm.

Environmental science & technology
2013-06 | Journal article
DOI: 10.1021/es401310j
PMID: 23721373
Contributors: Zhao HP; Ilhan ZE; Ontiveros-Valencia A; Tang Y; Rittmann BE; Krajmalnik-Brown R
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Phylogenetic analysis of nitrate- and sulfate-reducing bacteria in a hydrogen-fed biofilm.

FEMS microbiology ecology
2013-03 | Journal article
DOI: 10.1111/1574-6941.12107
PMID: 23480779
Contributors: Ontiveros-Valencia A; Ilhan ZE; Kang DW; Rittmann B; Krajmalnik-Brown R
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Using a two-stage hydrogen-based membrane biofilm reactor (MBfR) to achieve complete perchlorate reduction in the presence of nitrate and sulfate.

Environmental science & technology
2013-01 | Journal article
DOI: 10.1021/es303823n
PMID: 23298383
Contributors: Zhao HP; Ontiveros-Valencia A; Tang Y; Kim BO; Ilhan ZE; Krajmalnik-Brown R; Rittmann B
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Herbicide and antibiotic removal by woodchip denitrification filters: Sorption processes

Water, Air, and Soil Pollution
2012 | Journal article
DOI: 10.1007/s11270-011-1057-5
EID:

2-s2.0-84862168477

Part of ISSN: 00496979 15732932
Contributors: Ilhan, Z.E.; Ong, S.K.; Moorman, T.B.
Source: Self-asserted source
Zehra Esra Ilhan via Scopus - Elsevier

Effects of gut microbes on nutrient absorption and energy regulation.

Nutrition in clinical practice : official publication of the American Society for Parenteral and Enteral Nutrition
2012-02 | Journal article
DOI: 10.1177/0884533611436116
PMID: 22367888
PMC: PMC3601187
Contributors: Krajmalnik-Brown R; Ilhan ZE; Kang DW; DiBaise JK
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
grade
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Dissipation of atrazine, enrofloxacin, and sulfamethazine in wood chip bioreactors and impact on denitrification.

Journal of environmental quality
2011-11 | Journal article
DOI: 10.2134/jeq2011.0082
PMID: 22031564
Contributors: Ilhan ZE; Ong SK; Moorman TB
Source: Self-asserted source
Zehra Esra Ilhan via Europe PubMed Central
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Peer review (2 reviews for 2 publications/grants)

Review activity for Communications biology. (1)
Review activity for Nature communications (1)
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