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Works (6)

REEV: review, evaluate and explain variants

Nucleic Acids Research
2024-07-05 | Journal article
DOI: 10.1093/nar/gkae366
Contributors: Dzmitry Hramyka; Henrike Lisa Sczakiel; Max Xiaohang Zhao; Oliver Stolpe; Mikko Nieminen; Ronja Adam; Magdalena Danyel; Lara Einicke; René Hägerling; Alexej Knaus et al.
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Crossref

SODAR: managing multiomics study data and metadata

GigaScience
2022-12-28 | Journal article
DOI: 10.1093/gigascience/giad052
Contributors: Mikko Nieminen; Oliver Stolpe; Mathias Kuhring; January Weiner, III; Patrick Pett; Dieter Beule; Manuel Holtgrewe
Source: check_circle
Crossref

SODAR Core: a Django-based framework for scientific data management and analysis web apps

Journal of Open Source Software
2020-11-15 | Journal article
DOI: 10.21105/joss.01584
Contributors: Mikko Nieminen; Oliver Stolpe; Franziska Schumann; Manuel Holtgrewe; Dieter Beule
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Crossref

VarFish - Collaborative and Comprehensive Variant Analysis for Diagnosis and Research

2020-01-31 | Preprint
DOI: 10.1101/2020.01.27.921965
Contributors: Manuel Holtgrewe; Oliver Stolpe; Mikko Nieminen; Stefan Mundlos; Alexej Knaus; Uwe Kornak; Dominik Seelow; Lara Segebrecht; Malte Spielmann; Björn Fischer-Zirnsak et al.
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AltamISA: a Python API for ISA-Tab files

Journal of Open Source Software
2019-08-20 | Journal article
DOI: 10.21105/joss.01610
Contributors: Mathias Kuhring; Mikko Nieminen; Jennifer Kirwan; Dieter Beule; Manuel Holtgrewe
Source: check_circle
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SCelVis: Powerful explorative single cell data analysis on the desktop and in the cloud

2019-07-24 | Other
DOI: 10.1101/713008
Contributors: Benedikt Obermayer; Manuel Holtgrewe; Mikko Nieminen; Clemens Messerschmidt; Dieter Beule
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