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Employment (3)

Tempus Labs (United States): Durham, North Carolina, US

2022-09-12 to present | Senior Computational Biologist (Systems Biology)
Employment
Source: Self-asserted source
Matthew Berginski

University of North Carolina: NC, NC, US

2017 to 2022-08-12 | Research Scientist (Biomedical Engineering)
Employment
Source: Self-asserted source
Matthew Berginski

Duke University: Durham, NC, US

2013 to 2017 | Postdoc (Biomedical Engineering)
Employment
Source: Self-asserted source
Matthew Berginski

Education and qualifications (2)

University of North Carolina: NC, NC, US

2006 to 2013 | Ph.D (Biomedical Engineering)
Education
Source: Self-asserted source
Matthew Berginski

Georgia Institute of Technology: Atlanta, GA, US

2002 to 2006 | BS (Biomedical Engineering)
Education
Source: Self-asserted source
Matthew Berginski

Funding (1)

The Role of Ezrin in Membrane and Actin Interactions

2016-05-01 to 2017-04-30 | Grant
National Institute of General Medical Sciences (n/a, US)
URL: https://grants.uberresearch.com/100000057/F32GM119294/The-Role-of-Ezrin-in-Membrane-and-Actin-Interactions
GRANT_NUMBER: grant.F32GM119294
Source: Self-asserted source
Matthew Berginski via DimensionsWizard

Works (15)

Combined kinome inhibition states are predictive of cancer cell line sensitivity to kinase inhibitor combination therapies

2023-08-03 | Preprint
DOI: 10.1101/2023.08.01.551346
Contributors: Chinmaya U. Joisa; Kevin A. Chen; Samantha Beville; Timothy Stuhlmiller; Matthew E. Berginski; Denis Okumu; Brian T. Golitz; Gary L. Johnson; Shawn M. Gomez
Source: check_circle
Crossref

Kinome inhibition states and multiomics data enable prediction of cell viability in diverse cancer types

PLOS Computational Biology
2023-02-21 | Journal article
DOI: 10.1371/journal.pcbi.1010888
Contributors: Matthew E. Berginski; Inna Lavrik; Chinmaya U. Joisa; Brian T. Golitz; Shawn M. Gomez
Source: check_circle
Crossref

Integrated Single-Dose Kinome Profiling Data is Predictive of Cancer Cell Line Sensitivity to Kinase Inhibitors

2022-12-10 | Preprint
DOI: 10.1101/2022.12.06.519165
Contributors: Chinmaya U. Joisa; Kevin A. Chen; Matthew E. Berginski; Brian T. Golitz; Madison R. Jenner; Silvia G. Herrera Loeza; Jen Jen Yeh; Shawn M. Gomez
Source: check_circle
Crossref

Kinome Inhibition States and Multiomics Data Enable Prediction of Cell Viability in Diverse Cancer Types

2022-04-10 | Preprint
DOI: 10.1101/2022.04.08.487646
Contributors: Matthew E. Berginski; Chinmaya U. Joisa; Brian T. Golitz; Shawn M. Gomez
Source: check_circle
Crossref

Kinome state is predictive of cell viability in pancreatic cancer tumor and stroma cell lines

2021-07-22 | Other
DOI: 10.1101/2021.07.21.451515
Contributors: Matthew E. Berginski; Madison R. Jenner; Chinmaya U. Joisa; Silvia G. Herrera Loeza; Brian T. Golitz; Matthew B. Lipner; John R. Leary; Naim U. Rashid; Gary L. Johnson; Jen Jen Yeh et al.
Source: check_circle
Crossref

Transcriptomic analyses of gastrulation-stage mouse embryos with differential susceptibility to alcohol

Disease Models & Mechanisms
2021-06-01 | Journal article
DOI: 10.1242/dmm.049012
Contributors: Karen E. Boschen; Travis S. Ptacek; Matthew E. Berginski; Jeremy M. Simon; Scott E. Parnell
Source: check_circle
Crossref

The Dark Kinase Knowledgebase: an online compendium of knowledge and experimental results of understudied kinases

Nucleic Acids Research
2021-01-08 | Journal article
DOI: 10.1093/nar/gkaa853
Contributors: Matthew E Berginski; Nienke Moret; Changchang Liu; Dennis Goldfarb; Peter K Sorger; Shawn M Gomez
Source: check_circle
Crossref

A resource for exploring the understudied human kinome for research and therapeutic opportunities

2020-04-02 | Preprint
DOI: 10.1101/2020.04.02.022277
Contributors: Nienke Moret; Changchang Liu; Benjamin M. Gyori; John A. Bachman; Albert Steppi; Clemens Hug; Rahil Taujale; Liang-Chin Huang; Matthew E. Berginski; Shawn M. Gomez et al.
Source: check_circle
Crossref

Coral: Clear and Customizable Visualization of Human Kinome Data

Cell Systems
2018-09 | Journal article
DOI: 10.1016/j.cels.2018.07.001
Part of ISSN: 2405-4712
Source: Self-asserted source
Matthew Berginski

Tunable molecular tension sensors reveal extension-based control of vinculin loading

eLife
2018-07-19 | Journal article
DOI: 10.7554/elife.33927
Part of ISSN: 2050-084X
Source: Self-asserted source
Matthew Berginski

Construction, imaging, and analysis of FRET-based tension sensors in living cells

Methods in Cell Biology
2015 | Book chapter
DOI: 10.1016/bs.mcb.2014.10.033
Part of ISBN: 9780128011034
Part of ISSN: 0091-679X
Source: Self-asserted source
Matthew Berginski

β2-adrenoceptor signaling regulates invadopodia formation to enhance tumor cell invasion

Breast Cancer Research
2015-12 | Journal article
DOI: 10.1186/s13058-015-0655-3
Part of ISSN: 1465-542X
Source: Self-asserted source
Matthew Berginski

LKB1 loss in melanoma disrupts directional migration toward extracellular matrix cues

Journal of Cell Biology
2014-10-27 | Journal article
DOI: 10.1083/jcb.201404067
Part of ISSN: 1540-8140
Part of ISSN: 0021-9525
Source: Self-asserted source
Matthew Berginski

Engineered kinase activation reveals unique morphodynamic phenotypes and associated trafficking for Src family isoforms

Proceedings of the National Academy of Sciences
2014-08-26 | Journal article
DOI: 10.1073/pnas.1404487111
Part of ISSN: 0027-8424
Part of ISSN: 1091-6490
Source: Self-asserted source
Matthew Berginski

Automated analysis of invadopodia dynamics in live cells

PeerJ
2014-07-01 | Journal article
DOI: 10.7717/peerj.462
Part of ISSN: 2167-8359
Source: Self-asserted source
Matthew Berginski

Peer review (1 review for 1 publication/grant)

Review activity for PloS one. (1)
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