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Works (29)

Unzipped assemblies of polyploid root-knot nematode genomes reveal new kinds of unilateral composite telomeric repeats

2023-04-03 | Preprint
Contributors: Ana-Paula Zotta Mota; Georgios D Koutsovoulos; Laetitia Perfus-Barbeoch; Evelin Despot-Slade; Karine Labadie; Jean-Marc Aury; Karine Robbe-Sermesant; Marc Bailly-Bechet; Caroline Belser; Arthur Péré et al.
Source: check_circle
Crossref

Improvement of eukaryotic protein predictions from soil metagenomes

Scientific data
2022 | Journal article
Part of ISSN: 2052-4463
Contributors: Belliardo, Carole; Koutsovoulos, Georgios D; Rancurel, Corinne; Clément, Mathilde; Lipuma, Justine; Bailly-Bechet, Marc; Danchin, Etienne G J
Source: Self-asserted source
Marc Bailly-Bechet
grade
Preferred source (of 2)‎

AvP: a software package for automatic phylogenetic detection of candidate horizontal gene transfers

2022-06-27 | Preprint
Contributors: Georgios D. Koutsovoulos; Solène Granjeon Noriot; Marc Bailly-Bechet; Etienne G. J. Danchin; Corinne Rancurel
Source: check_circle
Crossref
grade
Preferred source (of 3)‎

Genome expression dynamics reveals parasitism regulatory landscape of the root-knot nematode <i>Meloidogyne incognita</i> and a promoter motif associated with effector genes

2021 | Other
Part of ISSN: 2073-4425
Contributors: Da Rocha, Martine; Bournaud, Caroline; Dazenière, Julie; Thorpe, Peter; Pellegrin, Clement; Bailly-Bechet, Marc; Péré, Arthur; Grynberg, Priscila; Perfus-Barbeoch, Laetitia; Eves-van den Akker, Sebastian et al.
Source: Self-asserted source
Marc Bailly-Bechet
grade
Preferred source (of 2)‎

Methylation at CpG sites in genomes of aphid <i>Acyrtosiphon pisum</i> and its endosymbiont <i>Buchnera</i>

2021 | Other
Contributors: Clément, Mathilde; Rocha, Martine Da; Agnel, S; ra; Raddatz, Guenter; Robichon, Alain; Bailly-Bechet, Marc
Source: Self-asserted source
Marc Bailly-Bechet

Movements of transposable elements contribute to the genomic plasticity and species diversification in an asexually reproducing nematode pest

Evolutionary applications
2021 | Journal article
Part of ISSN: 1752-4571
Contributors: Kozlowski, Djampa K L; Hassanaly-Goulamhoussen, Rahim; Da Rocha, Martine; Koutsovoulos, Georgios D; Bailly-Bechet, Marc; Danchin, Etienne G J
Source: Self-asserted source
Marc Bailly-Bechet

Population genomics supports clonal reproduction and multiple independent gains and losses of parasitic abilities in the most devastating nematode pest

Evolutionary applications
2020 | Journal article
Part of ISSN: 1752-4571
Contributors: Koutsovoulos, Georgios D; Marques, Eder; Arguel, Marie-Jeanne; Duret, Laurent; Machado, Andressa C Z; Carneiro, Regina M D G; Kozlowski, Djampa K; Bailly-Bechet, Marc; Castagnone-Sereno, Philippe; Albuquerque, Erika V S et al.
Source: Self-asserted source
Marc Bailly-Bechet

Sequencing the Genome of Indian Flying Fox, Natural Reservoir of Nipah Virus, Using Hybrid Assembly and Conservative Secondary Scaffolding

Frontiers in microbiology
2020 | Journal article
Part of ISSN: 1664-302X
Contributors: Fouret, Julien; Brunet, Frédéric G; Binet, Martin; Aurine, Noémie; Enchéry, Francois; Croze, Séverine; Guinier, Marie; Goumaidi, Abdelghafar; Preininger, Doris; Volff, Jean-Nicolas et al.
Source: Self-asserted source
Marc Bailly-Bechet

Social learning in great white pelicans (Pelecanus onocrotalus): A preliminary study

Learning & behavior
2020 | Journal article
Part of ISSN: 1543-4494
Contributors: Danel, Samara; Troina, Genyffer; Dufour, Valérie; Bailly-Bechet, Marc; von Bayern, Auguste M P; Osiurak, François
Source: Self-asserted source
Marc Bailly-Bechet

Evaluating sorghums as green manure against root-knot nematodes

Crop protection (Guildford, Surrey)
2019 | Journal article
Part of ISSN: 0261-2194
Contributors: Djian-Caporalino, Caroline; Bailly-Bechet, Marc; Bautheac, Pierre; Castagnone-Sereno, Philippe; Fazari, Ariane; Goillon, Claire; Marteu, Nathalie; Martiny, Bernard; Mateille, Thierry; Raptopoulo, Alizée et al.
Source: Self-asserted source
Marc Bailly-Bechet

Gene copy number variations as signatures of adaptive evolution in the parthenogenetic, plant-parasitic nematode Meloidogyne incognita

Molecular ecology
2019 | Journal article
Part of ISSN: 0962-1083
Contributors: Castagnone-Sereno, Philippe; Mulet, Karine; Danchin, Etienne G J; Koutsovoulos, Georgios D; Karaulic, Mégane; Da Rocha, Martine; Bailly-Bechet, Marc; Pratx, Loris; Perfus-Barbeoch, Laetitia; Abad, Pierre
Source: Self-asserted source
Marc Bailly-Bechet

The Landscape of L1 Retrotransposons in the Human Genome Is Shaped by Pre-insertion Sequence Biases and Post-insertion Selection

Molecular cell
2019 | Journal article
Part of ISSN: 1097-2765
Contributors: Sultana, Tania; van Essen, Dominic; Siol, Oliver; Bailly-Bechet, Marc; Philippe, Claude; Zine El Aabidine, Amal; Pioger, Léo; Nigumann, Pilvi; Saccani, Simona; Andrau, Jean-Christophe et al.
Source: Self-asserted source
Marc Bailly-Bechet

How Long Does Wolbachia Remain on Board?

Molecular biology and evolution
2017 | Journal article
Part of ISSN: 0737-4038
Contributors: Bailly-Bechet, Marc; Martins-Simões, Patricia; Szöllosi, Gergely J; Mialdea, Gladys; Sagot, Marie-France; Charlat, Sylvain
Source: Self-asserted source
Marc Bailly-Bechet

Hybridization and polyploidy enable genomic plasticity without sex in the most devastating plant-parasitic nematodes

PLoS genetics
2017 | Journal article
Part of ISSN: 1553-7390
Contributors: Blanc-Mathieu, Romain; Perfus-Barbeoch, Laetitia; Aury, Jean-Marc; Da Rocha, Martine; Gouzy, Jérôme; Sallet, Erika; Martin-Jimenez, Cristina; Bailly-Bechet, Marc; Castagnone-Sereno, Philippe; Flot, Jean-François et al.
Source: Self-asserted source
Marc Bailly-Bechet

Full-field interferometry for counting and differentiating aquatic biotic nanoparticles: from laboratory to <i>Tara</i> Oceans

Biomedical optics express
2016 | Journal article
Part of ISSN: 2156-7085
Contributors: Boccara, Martine; Fedala, Yasmina; Bryan, Catherine Venien; Bailly-Bechet, Marc; Bowler, Chris; Boccara, Albert Claude
Source: Self-asserted source
Marc Bailly-Bechet

Innate immune system activation by viral RNA: How to predict it?

Virology
2016 | Journal article
Part of ISSN: 1096-0341
Contributors: Kondili, M; Roux, M; Vabret, N; Bailly-Bechet, M
Source: Self-asserted source
Marc Bailly-Bechet

SENCA: A Multilayered Codon Model to Study the Origins and Dynamics of Codon Usage

Genome biology and evolution
2016 | Journal article
Part of ISSN: 1759-6653
Contributors: Pouyet, Fanny; Bailly-Bechet, Marc; Mouchiroud, Dominique; Guéguen, Laurent
Source: Self-asserted source
Marc Bailly-Bechet

Large-scale nucleotide optimization of simian immunodeficiency virus reduces its capacity to stimulate type I interferon in vitro

Journal of virology
2014 | Journal article
Part of ISSN: 0022-538X
Contributors: Vabret, Nicolas; Bailly-Bechet, Marc; Lepelley, Alice; Najburg, Valérie; Schwartz, Olivier; Verrier, Bernard; Tangy, Frédéric
Source: Self-asserted source
Marc Bailly-Bechet

“One code to find them all”: a perl tool to conveniently parse RepeatMasker output files

Mobile DNA
2014 | Journal article
Part of ISSN: 1759-8753
Contributors: Bailly-Bechet, Marc; Haudry, Annabelle; Lerat, Emmanuelle
Source: Self-asserted source
Marc Bailly-Bechet

Adult ovarian granulosa cell tumor transcriptomics: prevalence of FOXL2 target genes misregulation gives insights into the pathogenic mechanism of the p.Cys134Trp somatic mutation

Oncogene
2013 | Journal article
Part of ISSN: 0950-9232
Contributors: Benayoun, BA; Anttonen, M; L'Hôte, D; Bailly-Bechet, M; Andersson, N; Heikinheimo, M; Veitia, RA
Source: Self-asserted source
Marc Bailly-Bechet

Mammalian X chromosome inactivation evolved as a dosage-compensation mechanism for dosage-sensitive genes on the X chromosome

Proceedings of the National Academy of Sciences of the United States of America
2012 | Journal article
Part of ISSN: 0027-8424
Contributors: Pessia, Eugénie; Makino, Takashi; Bailly-Bechet, Marc; McLysaght, Aoife; Marais, Gabriel A B
Source: Self-asserted source
Marc Bailly-Bechet

The biased nucleotide composition of HIV-1 triggers type I interferon response and correlates with subtype D increased pathogenicity

PloS one
2012 | Journal article
Part of ISSN: 1932-6203
Contributors: Vabret, Nicolas; Bailly-Bechet, Marc; Najburg, Valérie; Müller-Trutwin, Michaela; Verrier, Bernard; Tangy, Frédéric
Source: Self-asserted source
Marc Bailly-Bechet

An externally modulated, noise-driven switch for the regulation of SPI1 in Salmonella enterica serovar Typhimurium

Journal of mathematical biology
2011 | Journal article
Part of ISSN: 0303-6812
Contributors: Bailly-Bechet, Marc; Benecke, Arndt; Hardt, Wolf Dietrich; Lanza, Valentina; Sturm, Alex; er; Zecchina, Riccardo
Source: Self-asserted source
Marc Bailly-Bechet

Finding undetected protein associations in cell signaling by belief propagation

Proceedings of the National Academy of Sciences of the United States of America
2011 | Journal article
Part of ISSN: 0027-8424
Contributors: Bailly-Bechet, M; Borgs, C; Braunstein, A; Chayes, J; Dagkessamanskaia, A; François, J-M; Zecchina, R
Source: Self-asserted source
Marc Bailly-Bechet

Inference of sparse combinatorial-control networks from gene-expression data: a message passing approach

BMC bioinformatics
2010 | Journal article
Part of ISSN: 1471-2105
Contributors: Bailly-Bechet, Marc; Braunstein, Alfredo; Pagnani, Andrea; Weigt, Martin; Zecchina, Riccardo
Source: Self-asserted source
Marc Bailly-Bechet

A modeling approach of the influence of local hydrodynamic conditions on larval dispersal at hydrothermal vents

Journal of theoretical biology
2008 | Journal article
Part of ISSN: 0022-5193
Contributors: Bailly-Bechet, Marc; Kerszberg, Michel; Gaill, Françoise; Pradillon, Florence
Source: Self-asserted source
Marc Bailly-Bechet

The identification and characterization of a FOXL2 response element provides insights into the pathogenesis of mutant alleles

Human molecular genetics
2008 | Journal article
Part of ISSN: 0964-6906
Contributors: Benayoun, Bérénice A; Caburet, S; rine; Dipietromaria, Aurélie; Bailly-Bechet, Marc; Batista, Frank; Fellous, Marc; Vaiman, Daniel; Veitia, Reiner A
Source: Self-asserted source
Marc Bailly-Bechet

Causes for the intriguing presence of tRNAs in phages

Genome research
2007 | Journal article
Part of ISSN: 1088-9051
Contributors: Bailly-Bechet, Marc; Vergassola, Massimo; Rocha, Eduardo
Source: Self-asserted source
Marc Bailly-Bechet

Codon usage domains over bacterial chromosomes

PLoS computational biology
2006 | Journal article
Part of ISSN: 1553-734X
Contributors: Bailly-Bechet, Marc; Danchin, Antoine; Iqbal, Mudassar; Marsili, Matteo; Vergassola, Massimo
Source: Self-asserted source
Marc Bailly-Bechet