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University of Jyvaskyla: Jyvaskyla, FI

Employment
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Perttu Permi

University of Helsinki: Helsinki, FI

Employment
Source: Self-asserted source
Perttu Permi

Works (32)

Direct pathway cloning and expression of the radiosumin biosynthetic gene cluster

Organic & Biomolecular Chemistry
2023 | Journal article
Contributors: Xiaodan Ouyang; Paul M. D'Agostino; Matti Wahlsten; Endrews Delbaje; Jouni Jokela; Perttu Permi; Greta Gaiani; Antti Poso; Piia Bartos; Tobias A. M. Gulder et al.
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1H, 13C, and 15N NMR chemical shift assignment of LytM N-terminal domain (residues 26–184)

Biomolecular NMR Assignments
2023-12 | Journal article
Contributors: Ilona Pitkänen; Helena Tossavainen; Perttu Permi
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Reassessing the substrate specificities of the majorStaphylococcus aureuspeptidoglycan hydrolases lysostaphin and LytM

2023-10-13 | Preprint
Contributors: Lina Antenucci; Salla Virtanen; Chandan Thapa; Minne Jartti; Ilona Pitkänen; Helena Tossavainen; Perttu Permi
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Crossref

A Plastic Biosynthetic Pathway for the Production of Structurally Distinct Microbial Sunscreens

ACS Chemical Biology
2023-01-01 | Journal article
OTHER-ID:

79112d6d-9a4b-42d5-afee-4c6ad737d002

Contributors: Arsın Sıla; Delbaje Endrews; Jokela Jouni; Wahlsten Matti; Farrar Zoë M.; Permi Perttu; Fewer David
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University of Jyväskylä

Aerobic exercise training and gut microbiome-associated metabolic shifts in women with overweight : a multi-omic study

Scientific Reports
2023-01-01 | Journal article
OTHER-ID:

c9d33988-6f4f-45d3-ad93-7d85c0789d21

Contributors: Hintikka Jukka E.; Ahtiainen Juha P.; Permi Perttu; Jalkanen Sirpa; Lehtonen Marko; Pekkala Satu
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University of Jyväskylä

Psychedelics promote plasticity by directly binding to BDNF receptor TrkB

Nature Neuroscience
2023-01-01 | Journal article
OTHER-ID:

698b8b1f-09a0-46a5-aeb0-db5b00a08b50

Contributors: Moliner Rafael; Girych Mykhailo; Brunello Cecilia A.; Kovaleva Vera; Biojone Caroline; Enkavi Giray; Antenucci Lina; Kot Erik F.; Goncharuk
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University of Jyväskylä

Structure of SNX9 SH3 in complex with a viral ligand reveals the molecular basis of its unique specificity for alanine-containing class I SH3 motifs

Structure
2022-06 | Journal article
Contributors: Helena Tossavainen; Hasan Uğurlu; Mikael Karjalainen; Maarit Hellman; Lina Antenucci; Riku Fagerlund; Kalle Saksela; Perttu Permi
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Branched-Chain Amino Acid Deprivation Decreases Lipid Oxidation and Lipogenesis in C2C12 Myotubes

Metabolites
2022-01-01 | Journal article
OTHER-ID:

258a4712-139e-42fc-a5d6-8fa5c778348a

Contributors: Karvinen Sira; Fachada Vasco; Sahinaho Ulla-Maria; Pekkala Satu; Lautaoja Juulia H.; Mäntyselkä; Sakari; Permi Perttu; Hulmi Juha J.; Silvenno
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University of Jyväskylä

Discovery of varlaxins, new aeruginosin-type inhibitors of human trypsins

Organic and Biomolecular Chemistry
2022-01-01 | Journal article
OTHER-ID:

e5f072ad-58d2-473b-ac05-4640d4b0243c

Contributors: Heinilä L. M.; P.; Jokela J.; Ahmed M.; N.; Wahlsten M.; Kumar S.; Hrouzek P.; Permi P.; Koistinen H.; Fewer D.; P.; Sivonen K.
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University of Jyväskylä

Hijacking the human complement inhibitor C4b-binding protein by the sporozoite stage of the Plasmodium falciparum parasite

Frontiers in Immunology
2022-01-01 | Journal article
OTHER-ID:

66f6952c-0032-473f-9826-cc2cbd1e1a30

Contributors: Khattab Ayman; Rezola Mikel; Barroso Marta; Kyrklund Mikael; Pihlajamaa Tero; Freitag Tobias L.; van Gemert Geert-Jan; Bousema Teun; Permi P
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University of Jyväskylä

Interaction mechanism of endogenous PP2A inhibitor protein ENSA with PP2A

FEBS Journal
2022-01-01 | Journal article
OTHER-ID:

dc5500d7-82af-45d9-9096-182fea3325cb

Contributors: Thapa Chandan; Roivas Pekka; Haataja Tatu; Permi Perttu; Pentikäinen Ulla
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University of Jyväskylä

Decreased temperature increases the expression of a disordered bacterial late embryogenesis abundant (LEA) protein that enhances natural transformation

Virulence
2021-12-31 | Journal article
Contributors: Terhi Maula; Nelli Vahvelainen; Helena Tossavainen; Tuuli Koivunen; Marja T. Pöllänen; Anders Johansson; Perttu Permi; Riikka Ihalin
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Evolutionary plasticity of SH3 domain binding by Nef proteins of the HIV-1/SIVcpz lentiviral lineage

PLOS Pathogens
2021-11-15 | Journal article
Contributors: Zhe Zhao; Raul Andino; Riku Fagerlund; Helena Tossavainen; Kristina Hopfensperger; Rishikesh Lotke; Smitha Srinivasachar Badarinarayan; Frank Kirchhoff; Perttu Permi; Kei Sato et al.
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Evolutionary plasticity of SH3 domain binding by Nef proteins of the HIV-1/SIVcpz lentiviral lineage

2021-06-22 | Other
Contributors: Zhe Zhao; Riku Fagerlund; Daniel Sauter; Helena Tossavainen; Perttu Permi; Frank Kirchhoff; Kalle Saksela
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Crossref

Enteroviruses and coronaviruses: similarities and therapeutic targets

Expert Opinion on Therapeutic Targets
2021-06-03 | Journal article
Contributors: Varpu Marjomäki; Kerttu Kalander; Maarit Hellman; Perttu Permi
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Crossref

1H, 13C, and 15N NMR chemical shift assignment of the complex formed by the first EPEC EspF repeat and N-WASP GTPase binding domain

Biomolecular NMR Assignments
2021-04-21 | Journal article
Contributors: Mikael Karjalainen; Maarit Hellman; Helena Tossavainen; Perttu Permi
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Potent Inhibitor of Human Trypsins from the Aeruginosin Family of Natural Products

ACS Chemical Biology
2021-01-01 | Journal article
OTHER-ID:

121f44de-da61-48c0-87d0-928e8fec6ee0

Contributors: Ahmed Muhammad N.; Wahlsten Matti; Jokela Jouni; Nees Matthias; Stenman Ulf-Håkan; Alvarenga Danillo O.; Strandin Tomas; Sivonen Kaarina; Pos
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University of Jyväskylä

The Interaction Mechanism of Intrinsically Disordered PP2A Inhibitor Proteins ARPP-16 and ARPP-19 With PP2A

Frontiers in Molecular Biosciences
2021-01-01 | Journal article
OTHER-ID:

c191e722-d9d5-4655-97da-e3bdda07a2a3

Contributors: Thapa Chandan; Roivas Pekka; Haataja Tatu; Permi Perttu; Pentikäinen Ulla
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University of Jyväskylä

HACANCOi: a new Hα-detected experiment for backbone resonance assignment of intrinsically disordered proteins

Journal of Biomolecular NMR
2020-12-28 | Journal article
Contributors: Mikael Karjalainen; Helena Tossavainen; Maarit Hellman; Perttu Permi
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1H, 13C and 15N NMR chemical shift assignments of cAMP-regulated phosphoprotein-19 and -16 (ARPP-19 and ARPP-16)

Biomolecular NMR Assignments
2020-10-28 | Journal article
Contributors: Chandan J. Thapa; Tatu Haataja; Ulla Pentikäinen; Perttu Permi
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grade
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Dispersion from Cα or NH: 4D experiments for backbone resonance assignment of intrinsically disordered proteins

Journal of Biomolecular NMR
2020-03 | Journal article
Contributors: Helena Tossavainen; Santeri Salovaara; Maarit Hellman; Riikka Ihalin; Perttu Permi
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Integrin cytoplasmic domain and pITAM compete for spleen tyrosine kinase binding

2019-01-18 | Other
Contributors: Lina Antenucci; Maarit Hellman; Vesa P. Hytönen; Perttu Permi; Jari Ylänne
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Crossref

Arabidopsis RCD1 coordinates chloroplast and mitochondrial functions through interaction with ANAC transcription factors

eLife
2019-01-01 | Journal article
OTHER-ID:

87af7172-18b1-48e8-a898-5a3ad37bfc16

Contributors: Shapiguzov Alexey; Vainonen Julia P.; Hunter Kerri; Tossavainen Helena; Tiwari Arjun; Järvi Sari; Hellman Maarit; Aarabi Fayezeh; Alseekh Sa
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University of Jyväskylä

Critical Structural Defects Explain Filamin A Mutations Causing Mitral Valve Dysplasia

Biophysical Journal
2019-01-01 | Journal article
OTHER-ID:

5df5ac5d-f0b4-4947-a737-6a87fb093ced

Contributors: Haataja Tatu J.K.; Capoulade Romain; Lecointe Simon; Hellman Maarit; Merot Jean; Permi Perttu; Pentikäinen Ulla
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University of Jyväskylä

Towards Controlled Synthesis of Water-Soluble Gold Nanoclusters : Synthesis and Analysis

The Journal of Physical Chemistry C
2019-01-01 | Journal article
OTHER-ID:

997f1301-08fd-431d-9819-59071fff897d

Contributors: Sokolowska Karolina; Malola Sami; Lahtinen Manu; Saarnio Ville; Permi Perttu; Koskinen Katariina; Jalasvuori Matti; Häkkinen Hannu; Lehtovaar
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University of Jyväskylä

Structural and Functional Insights into Lysostaphin-Substrate Interaction

Frontiers in Molecular Biosciences
2018-01-01 | Journal article
OTHER-ID:

de4227f1-82cf-4a45-8632-04dd3c49339c

Contributors: Tossavainen Helena; Raulinaitis Vytas; Kauppinen Linda; Pentikäinen Ulla; Maaheimo Hannu; Permi Perttu
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University of Jyväskylä

Structural Tuning and Conformational Stability of Aromatic Oligoamide Foldamers

Chemistry – A European Journal
2017-11-21 | Journal article
Contributors: Riia Annala; Aku Suhonen; Heikki Laakkonen; Perttu Permi; Maija Nissinen
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Crossref

1H, 13C and 15N NMR chemical shift assignments of A. thaliana RCD1 RST

Biomolecular NMR Assignments
2017-10 | Journal article
Contributors: Helena Tossavainen; Maarit Hellman; Julia P. Vainonen; Jaakko Kangasjärvi; Perttu Permi
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Crossref

1H, 13C and 15N resonance assignments of the new lysostaphin family endopeptidase catalytic domain from Staphylococcus aureus

Biomolecular NMR Assignments
2017-04 | Journal article
Contributors: Vytas Raulinaitis; Helena Tossavainen; Olli Aitio; Raili Seppala; Perttu Permi
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Crossref

Dynamic Stabilization of the Ligand-Metal Interface in Atomically Precise Gold Nanoclusters Au68 and Au144 Protected by meta-Mercaptobenzoic Acid

ACS Nano
2017-01-01 | Journal article
OTHER-ID:

dfef31fa-4479-4fc3-835f-ae1f6b630702

Contributors: Tero Tiia-Riikka; Malola Sami; Koncz Benedek; Pohjolainen Emmi; Lautala Saara; Mustalahti Satu; Permi Perttu; Groenhof Gerrit; Pettersson Mi
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University of Jyväskylä

Skeletal Dysplasia Mutations Effect on Human Filamins’ Structure and Mechanosensing

Scientific Reports
2017-01-01 | Journal article
OTHER-ID:

4ce2b9d5-1797-4279-9305-c5e3d9d4ad38

Contributors: Seppälä; Jonne; Bernardi Rafael C.; Haataja Tatu; Hellman Maarit; Pentikäinen Olli; Schulten Klaus; Permi Perttu; Ylänne Jari; Pentikäinen Ul
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University of Jyväskylä

Hydrophobic pocket targeting probes for enteroviruses

Nanoscale
2015-01-01 | Journal article
OTHER-ID:

62b7ab53-5d0d-446b-9d33-8a503099717b

Contributors: Martikainen Mari; Salorinne Kirsi; Lahtinen Tanja; Malola Sami; Permi Perttu; Häkkinen Hannu; Marjomäki Varpu
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University of Jyväskylä