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ResearcherID: ABD-5538-2020
Scopus Author ID: 56270477300

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Employment (2)

University of Basel: Basel, Basel-Stadt, CH

2020-03-01 to present | Postdoc Fellow (Biozentrum)
Employment
Source: Self-asserted source
Yinan Wan

Howard Hughes Medical Institute Janelia Farm Research Campus: Ashburn, VA, US

2013-10-01 to 2019-06-01 | Student/Postdoc Researcher
Employment
Source: Self-asserted source
Yinan Wan

Education and qualifications (2)

University of Cambridge: Cambridge, Cambridgeshire, GB

2012-10-01 to 2017-05-31 | PhD (Physiology, Development and Neuroscience)
Education
Source: Self-asserted source
Yinan Wan

Peking University: Beijing, Beijing, CN

2007-09-01 to 2012-09-01 | B.S. in Life Science (Yuanpei College)
Education
Source: Self-asserted source
Yinan Wan

Professional activities (1)

Life Sciences Switzerland: Zurich, CH

2021-01-01 to present | Board Member of Executive Committee (Microscopy Intersection)
Service
Source: Self-asserted source
Yinan Wan

Funding (2)

Formation of tissue boundaries during zebrafish embryogenesis

2022-09 to 2023-08 | Grant
HORIZON EUROPE Framework Programme (Bern, CH)
Source: Self-asserted source
Yinan Wan

Formation of tissue boundaries during zebrafish embryogenesis

2021-01 to 2022-08 | Grant
EMBO (Heidelberg, DE)
GRANT_NUMBER:

ALTF-709-2020
Source: Self-asserted source
Yinan Wan

Works (16)

Whole-embryo Spatial Transcriptomics at Subcellular Resolution from Gastrulation to Organogenesis

2024-08-27 | Preprint | Author
DOI: 10.1101/2024.08.27.609868
Contributors: Yinan Wan; Jakob El Kholtei; Kresna Jenie; Mariona Colomer-Rosell; Jialin Liu; Joaquin Navajas Acedo; Lucia Du; Mireia Codina-Tobias; Mengfan Wang; Ahilya Sawh et al.
Source: Self-asserted source
Yinan Wan

Automated reconstruction of whole-embryo cell lineages by learning from sparse annotations.

Nature biotechnology
2022-09-05 | Journal article
DOI: 10.1038/s41587-022-01427-7
PMID: 36065022
PMC: PMC7614077
Contributors: Malin-Mayor C; Peter Hirsch; Léo Guignard; McDole K; Wan Y; William Lemon; Kainmueller D; Philipp Keller; Stephan Preibisch; Jan Funke
Source: Self-asserted source
Yinan Wan

Current approaches to fate mapping and lineage tracing using image data.

Development (Cambridge, England)
2021-09-09 | Journal article | Author
DOI: 10.1242/dev.198994
PMID: 34498046
Contributors: Steffen Wolf; Yinan Wan; Katie McDole
Source: Self-asserted source
Yinan Wan

Live Imaging of Zebrafish

Imaging from Cells to Animals In Vivo
2020 | Book chapter
Contributors: Wan, Yinan; Keller, Philipp J; Höckendorf, Burkhard
Source: Self-asserted source
Yinan Wan

Nuclear crowding and nonlinear diffusion during interkinetic nuclear migration in the zebrafish retina.

eLife
2020-10-06 | Journal article
DOI: 10.7554/elife.58635
PMID: 33021471
PMC: PMC7538155
Contributors: Afnan Azizi; Anne Materne; Wan Y; Buse SJ; Philipp Keller; Raymond Goldstein; William A Harris
Source: Self-asserted source
Yinan Wan

Single-Cell Reconstruction of Emerging Population Activity in an Entire Developing Circuit.

Cell
2019-09 | Journal article
DOI: 10.1016/j.cell.2019.08.039
PMID: 31564455
Contributors: Wan Y; Wei Z; Looger LL; Koyama M; Druckmann S; Keller PJ
Source: Self-asserted source
Yinan Wan via Europe PubMed Central

Histone H3K27 acetylation precedes active transcription during zebrafish zygotic genome activation as revealed by live-cell analysis.

Development (Cambridge, England)
2019-09-30 | Journal article
DOI: 10.1242/dev.179127
PMID: 31570370
PMC: PMC6803375
Source: Self-asserted source
Yinan Wan

Light-Sheet Microscopy and Its Potential for Understanding Developmental Processes.

Annual review of cell and developmental biology
2019-07 | Journal article
DOI: 10.1146/annurev-cellbio-100818-125311
PMID: 31299171
Contributors: Wan Y; McDole K; Keller PJ
Source: Self-asserted source
Yinan Wan via Europe PubMed Central

Adaptive light-sheet microscopy for long-term, high-resolution imaging in living organisms.

Nature biotechnology
2016-12 | Journal article
DOI: 10.1038/nbt.3708
PMID: 27798562
Source: Self-asserted source
Yinan Wan via Europe PubMed Central

The ciliary marginal zone of the zebrafish retina: clonal and time-lapse analysis of a continuously growing tissue.

Development (Cambridge, England)
2016-04 | Journal article
DOI: 10.1242/dev.133314
PMID: 26893352
PMC: PMC4852496
Source: Self-asserted source
Yinan Wan via Europe PubMed Central

Real-Time Three-Dimensional Cell Segmentation in Large-Scale Microscopy Data of Developing Embryos.

Developmental cell
2016-01 | Journal article
DOI: 10.1016/j.devcel.2015.12.028
PMID: 26812020
Source: Self-asserted source
Yinan Wan via Europe PubMed Central

Whole-animal functional and developmental imaging with isotropic spatial resolution.

Nature methods
2015-12 | Journal article
DOI: 10.1038/nmeth.3632
PMID: 26501515
Source: Self-asserted source
Yinan Wan via Europe PubMed Central

Efficient processing and analysis of large-scale light-sheet microscopy data.

Nature protocols
2015-11 | Journal article
DOI: 10.1038/nprot.2015.111
PMID: 26426501
Source: Self-asserted source
Yinan Wan via Europe PubMed Central

BlastNeuron for Automated Comparison, Retrieval and Clustering of 3D Neuron Morphologies.

Neuroinformatics
2015-10 | Journal article
DOI: 10.1007/s12021-015-9272-7
PMID: 26036213
Source: Self-asserted source
Yinan Wan via Europe PubMed Central

Fast, accurate reconstruction of cell lineages from large-scale fluorescence microscopy data.

Nature methods
2014-09 | Journal article
DOI: 10.1038/nmeth.3036
PMID: 25042785
Source: Self-asserted source
Yinan Wan via Europe PubMed Central

AHD2.0: an update version of Arabidopsis Hormone Database for plant systematic studies.

Nucleic acids research
2011-01 | Journal article
DOI: 10.1093/nar/gkq1066
PMID: 21045062
PMC: PMC3013673
Source: Self-asserted source
Yinan Wan via Europe PubMed Central

Peer review (1 review for 1 publication/grant)

Review activity for Cell reports. (1)
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