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Works (11)

RESCRIPt: Reproducible sequence taxonomy reference database management

PLOS Computational Biology
2021-11-08 | Journal article
Contributors: Michael S. Robeson; Mihaela Pertea; Devon R. O’Rourke; Benjamin D. Kaehler; Michal Ziemski; Matthew R. Dillon; Jeffrey T. Foster; Nicholas A. Bokulich
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Crossref

Experiences and lessons learned from two virtual, hands-on microbiome bioinformatics workshops

PLOS Computational Biology
2021-06-24 | Journal article
Contributors: Matthew R. Dillon; Francis Ouellette; Evan Bolyen; Anja Adamov; Aeriel Belk; Emily Borsom; Zachary Burcham; Justine W. Debelius; Heather Deel; Alex Emmons et al.
Source: check_circle
Crossref

Reproducibly sampling SARS-CoV-2 genomes across time, geography, and viral diversity [version 2; peer review: 2 approved]

2020-10-28 | Journal article
Part of ISSN: 2046-1402
Contributors: Evan Bolyen; Matthew R. Dillon; Nicholas A. Bokulich; Jason T. Ladner; Brendan B. Larsen; Crystal M. Hepp; Darrin Lemmer; Jason W. Sahl; Andrew Sanchez; Chris Holdgraf et al.
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F1000
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Preferred source (of 2)‎

RESCRIPt: Reproducible sequence taxonomy reference database management for the masses

2020-10-05 | Other
Contributors: Michael S. Robeson, II; Devon R. O’Rourke; Benjamin D. Kaehler; Michal Ziemski; Matthew R. Dillon; Jeffrey T. Foster; Nicholas A. Bokulich
Source: check_circle
Crossref

Reproducibly sampling SARS-CoV-2 genomes across time, geography, and viral diversity

F1000Research
2020-06-29 | Journal article
Contributors: Evan Bolyen; Matthew R. Dillon; Nicholas A. Bokulich; Jason T. Ladner; Brendan B. Larsen; Crystal M. Hepp; Darrin Lemmer; Jason W. Sahl; Andrew Sanchez; Chris Holdgraf et al.
Source: check_circle
Crossref

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

Nature Biotechnology
2019-09-09 | Journal article
Contributors: Evan Bolyen; Jai Ram Rideout; Matthew R. Dillon; Nicholas A. Bokulich; Christian C. Abnet; Gabriel A. Al-Ghalith; Harriet Alexander; Eric J. Alm; Manimozhiyan Arumugam; Francesco Asnicar et al.
Source: check_circle
Crossref

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

Nature Biotechnology
2019-08-24 | Journal article
Contributors: Evan Bolyen; Jai Ram Rideout; Matthew R. Dillon; Nicholas A. Bokulich; Christian C. Abnet; Gabriel A. Al-Ghalith; Harriet Alexander; Eric J. Alm; Manimozhiyan Arumugam; Francesco Asnicar et al.
Source: check_circle
Crossref

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

2018-12-03 | Other
Contributors: Evan Bolyen; Jai Ram Rideout; Matthew R Dillon; Nicholas A Bokulich; Christian Abnet; Gabriel A Al-Ghalith; Harriet Alexander; Eric J Alm; Manimozhiyan Arumugam; Francesco Asnicar et al.
Source: check_circle
Crossref

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

2018-12-03 | Other
Contributors: Evan Bolyen; Jai Ram Rideout; Matthew R Dillon; Nicholas A Bokulich; Christian Abnet; Gabriel A Al-Ghalith; Harriet Alexander; Eric J Alm; Manimozhiyan Arumugam; Francesco Asnicar et al.
Source: check_circle
Crossref

q2-sample-classifier: machine-learning tools for microbiome classification and regression

Journal of Open Source Software
2018-10-23 | Journal article
Contributors: Nicholas Bokulich; Matthew Dillon; Evan Bolyen; Benjamin Kaehler; Gavin Huttley; J Caporaso
Source: check_circle
Crossref

An Introduction to Applied Bioinformatics: a free, open, and interactive text.

Journal of Open Source Education
2018-10-02 | Journal article
Contributors: Evan Bolyen; Jai Ram Rideout; John Chase; T. Anders Pitman; Arron Shiffer; Willow Mercurio; Matthew R Dillon; J Gregory Caporaso
Source: check_circle
Crossref