Personal information

Emails & domains

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Verified email domains

Websites & social links

https://hannahchoi.math.gatech.edu/

Other IDs

Scopus Author ID: 36619559200

Keywords

Computational Neuroscience, Applied Mathematics

Activities

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Employment (4)

Georgia Institute of Technology: Atlanta, GA, US

2021-01-01 to present | Assistant Professor (School of Mathematics)
Employment
Source: Self-asserted source
Hannah Choi

Allen Institute for Brain Science: Seattle, WA, US

2017-06 to 2020-12 | Visiting Scientist
Employment
Source: Self-asserted source
Hannah Choi

University of Washington: Seattle, WA, US

2014-12 to 2020-12 | Postdoc
Employment
Source: Self-asserted source
Hannah Choi

University of California, Berkeley: Berkeley, California, US

2018-01 to 2018-05 | Patrick J. McGovern Research Fellow (Simons Institute for the Theory of Computing)
Employment
Source: Self-asserted source
Hannah Choi

Education and qualifications (2)

Northwestern University: Evanston, IL, US

2009 to 2014 | PhD (Applied Mathematics)
Education
Source: Self-asserted source
Hannah Choi

University of California Berkeley: Berkeley, CA, US

2004 to 2007 | BA (Applied Mathematics)
Education
Source: Self-asserted source
Hannah Choi

Funding (7)

FLAP- Fast, Lexicographic Agile Perception Integrates Decision

2022-09 to 2027-09 | Grant
United States Air Force Office of Scientific Research (Arlington, Virginia, US)
GRANT_NUMBER:

FA9550-22-1-0315
Source: Self-asserted source
Hannah Choi

Alfred P. Sloan Research Fellowship

2022-09 to 2024-09 | Award
Alfred P. Sloan Foundation (New York, US)
URL: https://sloan.org/fellows-database
GRANT_NUMBER:

FG-2022-18969
Source: Self-asserted source
Hannah Choi

Bridging structure, dynamics, and information processing in brain networks

2019-09-01 to 2023-12-31 | Grant
National Eye Institute (Bethesda, US)
URL: https://app.dimensions.ai/details/grant/grant.9615057
GRANT_NUMBER: R00EY030840
Source: Self-asserted source
Hannah Choi via DimensionsWizard

Bridging structure, dynamics, and information processing in brain networks

2019-09-01 to 2021-08-31 | Grant
National Eye Institute (Bethesda, US)
URL: https://app.dimensions.ai/details/grant/grant.8633085
GRANT_NUMBER: K99EY030840
Source: Self-asserted source
Hannah Choi via DimensionsWizard

Simons-Berkeley Research Fellowship

2018-01 to 2018-05 | Award
Simons Foundation (NY, NY, US)
GRANT_NUMBER: Simons-Berkeley Research Fellowship
Source: Self-asserted source
Hannah Choi

Washington Research Foundation Innovation Postdoctoral Fellowship

2014-12 to 2016-12 | Award
Washington Research Foundation (Seattle, WA, US)
GRANT_NUMBER: University of Washington Institute for Neuroengineering
Source: Self-asserted source
Hannah Choi

Summer Integrative Cancer Biology Program Fellowship

2007-06 to 2007-08 | Award
National Cancer Institute (Md., Md., US)
Source: Self-asserted source
Hannah Choi

Works (28)

Constructing Biologically Constrained RNNs via Dale’s Backprop and Topologically-Informed Pruning

2025-01-13 | Preprint
DOI: 10.1101/2025.01.09.632231
Contributors: Aishwarya H. Balwani; Alex Q. Wang; Farzaneh Najafi; Hannah Choi
Source: check_circle
Crossref

Temporal resolution of spike coding in feedforward networks with signal convergence and divergence

2024-07-11 | Preprint
DOI: 10.1101/2024.07.08.602598
Contributors: Zach Mobille; Usama Bin Sikandar; Simon Sponberg; Hannah Choi
Source: check_circle
Crossref

Stimulus type shapes the topology of cellular functional networks in mouse visual cortex

Nature Communications
2024-07-09 | Journal article
DOI: 10.1038/s41467-024-49704-0
Contributors: Disheng Tang; Joel Zylberberg; Xiaoxuan Jia; Hannah Choi
Source: check_circle
Crossref

Active sensing with predictive coding and uncertainty minimization

Patterns
2024-05 | Journal article
DOI: 10.1016/j.patter.2024.100983
Part of ISSN: 2666-3899
Contributors: Abdelrahman Sharafeldin; Nabil Imam; Hannah Choi
Source: Self-asserted source
Hannah Choi

Exploring the Architectural Biases of the Canonical Cortical Microcircuit

2024-05-24 | Preprint
DOI: 10.1101/2024.05.23.595629
Contributors: Aishwarya Balwani; Suhee Cho; Hannah Choi
Source: check_circle
Crossref

On the physiological and structural contributors to the overall balance of excitation and inhibition in local cortical networks

Journal of Computational Neuroscience
2024-02 | Journal article
DOI: 10.1007/s10827-023-00863-x
Contributors: Farshad Shirani; Hannah Choi
Source: check_circle
Crossref

One-hot generalized linear model for switching brain state discovery

The 12th International Conference on Learning Representations (ICLR)
2024-01-16 | Conference paper
Contributors: Chengrui Li; Soon Ho Kim; Chris Rodgers; Hannah Choi; Anqi Wu
Source: Self-asserted source
Hannah Choi

Active Sensing with Predictive Coding and Uncertainty Minimization

2023 | Preprint
DOI: 10.48550/ARXIV.2307.00668
Contributors: Abdelrahman Sharafeldin; Nabil Imam; Hannah Choi
Source: Self-asserted source
Hannah Choi

Allen Institute Openscope - Differential encoding of temporal context and expectation

2023 | Dataset
DOI: 10.48324/DANDI.000488/0.230602.2022
Contributors: Jerome A. Lecoq; Marina Garrett; Hannah Choi; Luca Mazzucato; David Wyrick
Source: Self-asserted source
Hannah Choi

One-hot Generalized Linear Model for Switching Brain State Discovery

2023 | Preprint
DOI: 10.48550/ARXIV.2310.15263
Contributors: Chengrui Li; Soon Ho Kim; Chris Rodgers; Hannah Choi; Anqi Wu
Source: Self-asserted source
Hannah Choi

Lateral inhibition in V1 controls neural & perceptual contrast sensitivity

2023-11-14 | Preprint | Author
DOI: 10.1101/2023.11.10.566605
Contributors: Joseph Del Rosario; Stefano Coletta; Soon Ho Kim; Zachary Mobille; Kayla Peelman; Brice Williams; Alan J Otsuki; Alejandra Del Castillo Valerio; Kendell Worden; Lou T. Blanpain et al.
Source: Self-asserted source
Hannah Choi

Stimulus-dependent functional network topology in mouse visual cortex

2023-07-03 | Preprint
DOI: 10.1101/2023.07.03.547364
Contributors: Disheng Tang; Joel Zylberberg; Xiaoxuan Jia; Hannah Choi
Source: check_circle
Crossref

Predicting visually-modulated precisely-timed spikes across a coordinated and comprehensive motor program

2023 International Joint Conference on Neural Networks (IJCNN)
2023-06-18 | Conference paper
DOI: 10.1109/ijcnn54540.2023.10191280
Contributors: Usama Bin Sikandar; Hannah Choi; Joy Putney; Hengye Yang; Silvia Ferrari; Simon Sponberg
Source: Self-asserted source
Hannah Choi

Differential encoding of temporal context and expectation under representational drift across hierarchically connected areas

2023-06-03 | Preprint | Author
DOI: 10.1101/2023.06.02.543483
Contributors: David Wyrick; Nick Cain; Rylan Larsen; Jérôme A. Lecoq; Matt Valley; Ruweida Ahmed; Jessica Bowlus; Gabriella Boyer; Shiella Caldejon; Linzy Casal et al.
Source: Self-asserted source
Hannah Choi

On the physiological and structural contributors to the overall balance of excitation and inhibition in local cortical networks

2023-01-10 | Preprint
DOI: 10.1101/2023.01.10.523489
Contributors: Farshad Shirani; Hannah Choi
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Survey of spiking in the mouse visual system reveals functional hierarchy

Nature
2021-04-01 | Journal article
DOI: 10.1038/s41586-020-03171-x
Contributors: Joshua H. Siegle; Xiaoxuan Jia; Séverine Durand; Sam Gale; Corbett Bennett; Nile Graddis; Greggory Heller; Tamina K. Ramirez; Hannah Choi; Jennifer A. Luviano et al.
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Hierarchical organization of cortical and thalamic connectivity

Nature
2019-10-30 | Journal article
DOI: 10.1038/s41586-019-1716-z
Part of ISSN: 0028-0836
Part of ISSN: 1476-4687
Source: Self-asserted source
Hannah Choi

A survey of spiking activity reveals a functional hierarchy of mouse corticothalamic visual areas

bioRxiv
2019-10-16 | Preprint
DOI: 10.1101/805010
Source: Self-asserted source
Hannah Choi

Synchronization dependent on spatial structures of a mesoscopic whole-brain network.

PLoS computational biology
2019-04-23 | Journal article
DOI: 10.1371/journal.pcbi.1006978
PMID: 31013267
Source: Self-asserted source
Hannah Choi
grade
Preferred source (of 2)‎

Predictive Coding in Area V4: Dynamic Shape Discrimination under Partial Occlusion

Neural Computation
2018-03 | Journal article
DOI: 10.1162/neco_a_01072
Part of ISSN: 0899-7667
Contributors: Hannah Choi; Anitha Pasupathy; Eric Shea-Brown
Source: Self-asserted source
Hannah Choi via Crossref Metadata Search

Dynamic representation of partially occluded objects in primate prefrontal and visual cortex

eLife
2017-09 | Journal article
DOI: 10.7554/elife.25784
Contributors: Amber M Fyall; Yasmine El-Shamayleh; Hannah Choi; Eric Shea-Brown; Anitha Pasupathy
Source: Self-asserted source
Hannah Choi via Crossref Metadata Search
grade
Preferred source (of 2)‎

Author response: Dynamic representation of partially occluded objects in primate prefrontal and visual cortex

2017-06 | Other
DOI: 10.7554/elife.25784.031
Contributors: Amber M Fyall; Yasmine El-Shamayleh; Hannah Choi; Eric Shea-Brown; Anitha Pasupathy
Source: Self-asserted source
Hannah Choi via Crossref Metadata Search

Intrinsic bursting of AII amacrine cells underlies oscillations in the rd1 mouse retina

Journal of Neurophysiology
2014 | Journal article
DOI: 10.1152/jn.00437.2014
EID:

2-s2.0-84907257185
Contributors: Choi, H.; Zhang, L.; Cembrowski, M.S.; Sabottke, C.F.; Markowitz, A.L.; Butts, D.A.; Kath, W.L.; Singer, J.H.; Riecke, H.
Source: Self-asserted source
Hannah Choi via Scopus - Elsevier

Spikelets and bursts in axonless retinal AII amacrine cells coupled by gap junctions.

2013 | Journal article
PMC: PMC3704770
Contributors: Riecke H; Choi H; Cembrowski MS; Kath WL; Singer JH
Source: Self-asserted source
Hannah Choi via Europe PubMed Central

Reply to the comment by A. Gadomski

EPL
2010 | Journal article
DOI: 10.1209/0295-5075/89/40003
EID:

2-s2.0-79051471162
Contributors: Choi, M.Y.; Choi, H.; Fortin, J.-Y.; Choi, J.
Source: Self-asserted source
Hannah Choi via Scopus - Elsevier

Sleepless in Seoul: 'The Ant and the Metrohopper'

Journal of the Korean Physical Society
2010 | Journal article
DOI: 10.3938/jkps.57.823
EID:

2-s2.0-78149364694
Contributors: Lee, K.; Park, J.S.; Choi, H.; Choi, M.Y.; Jung, W.-S.
Source: Self-asserted source
Hannah Choi via Scopus - Elsevier

How skew distributions emerge in evolving systems

EPL
2009 | Journal article
DOI: 10.1209/0295-5075/85/30006
EID:

2-s2.0-77949520498
Contributors: Choi, M.Y.; Choi, H.; Fortin, J.-Y.; Choi, J.
Source: Self-asserted source
Hannah Choi via Scopus - Elsevier

Synchronization dependent on spatial structures of a mesoscopic whole-brain network

Other
DOI: 10.1101/319830
Contributors: Hannah Choi; Stefan Mihalas
Source: Self-asserted source
Hannah Choi via Crossref Metadata Search
grade
Preferred source (of 2)‎

Peer review (3 reviews for 3 publications/grants)

Review activity for Nature (1)
Review activity for Nature communications (1)
Review activity for Nature neuroscience. (1)
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