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Education and qualifications (2)

University of California Los Angeles: Los Angeles, CA, US

Graduate (Statistics)
Education
Source: Self-asserted source
Xinzhou Ge

Peking University: Beijing, Beijing, CN

Undergraduate (School of Mathematical Science)
Education
Source: Self-asserted source
Xinzhou Ge

Works (23)

APIR: Aggregating Universal Proteomics Database Search Algorithms for Peptide Identification with FDR Control

Genomics, Proteomics & Bioinformatics
2024-07-03 | Journal article
Contributors: Yiling Elaine Chen; Xinzhou Ge; Kyla Woyshner; MeiLu McDermott; Antigoni Manousopoulou; Scott B Ficarro; Jarrod A Marto; Kexin Li; Leo David Wang; Jingyi Jessica Li et al.
Source: check_circle
Crossref

ClipperQTL: ultrafast and powerful eGene identification method

2023-08-29 | Preprint
Contributors: Heather J. Zhou; Xinzhou Ge; Jingyi Jessica Li
Source: check_circle
Crossref

Synthetic control removes spurious discoveries from double dipping in single-cell and spatial transcriptomics data analyses

2023-07-25 | Preprint
Contributors: Dongyuan Song; Siqi Chen; Christy Lee; Kexin Li; Xinzhou Ge; Jingyi Jessica Li
Source: check_circle
Crossref

Data from METTL3-Mediated m<sup>6</sup>A Modification Controls Splicing Factor Abundance and Contributes to Aggressive CLL

2023-05-01 | Preprint
Contributors: Yiming Wu; Meiling Jin; Mike Fernandez; Kevyn L. Hart; Aijun Liao; Xinzhou Ge; Stacey M. Fernandes; Tinisha McDonald; Zhenhua Chen; Daniel Röth et al.
Source: check_circle
Crossref

Data from METTL3-Mediated m<sup>6</sup>A Modification Controls Splicing Factor Abundance and Contributes to Aggressive CLL

2023-05-01 | Preprint
Contributors: Yiming Wu; Meiling Jin; Mike Fernandez; Kevyn L. Hart; Aijun Liao; Xinzhou Ge; Stacey M. Fernandes; Tinisha McDonald; Zhenhua Chen; Daniel Röth et al.
Source: check_circle
Crossref

METTL3-Mediated m6A Modification Controls Splicing Factor Abundance and Contributes to Aggressive CLL

Blood Cancer Discovery
2023-05-01 | Journal article
Contributors: Yiming Wu; Meiling Jin; Mike Fernandez; Kevyn L. Hart; Aijun Liao; Xinzhou Ge; Stacey M. Fernandes; Tinisha McDonald; Zhenhua Chen; Daniel Röth et al.
Source: check_circle
Crossref

Supplementary Figures S1-8 from METTL3-Mediated m<sup>6</sup>A Modification Controls Splicing Factor Abundance and Contributes to Aggressive CLL

2023-05-01 | Preprint
Contributors: Yiming Wu; Meiling Jin; Mike Fernandez; Kevyn L. Hart; Aijun Liao; Xinzhou Ge; Stacey M. Fernandes; Tinisha McDonald; Zhenhua Chen; Daniel Röth et al.
Source: check_circle
Crossref

Supplementary Figures S1-8 from METTL3-Mediated m<sup>6</sup>A Modification Controls Splicing Factor Abundance and Contributes to Aggressive CLL

2023-05-01 | Preprint
Contributors: Yiming Wu; Meiling Jin; Mike Fernandez; Kevyn L. Hart; Aijun Liao; Xinzhou Ge; Stacey M. Fernandes; Tinisha McDonald; Zhenhua Chen; Daniel Röth et al.
Source: check_circle
Crossref

Supplementary Tables S1-5 from METTL3-Mediated m<sup>6</sup>A Modification Controls Splicing Factor Abundance and Contributes to Aggressive CLL

2023-05-01 | Preprint
Contributors: Yiming Wu; Meiling Jin; Mike Fernandez; Kevyn L. Hart; Aijun Liao; Xinzhou Ge; Stacey M. Fernandes; Tinisha McDonald; Zhenhua Chen; Daniel Röth et al.
Source: check_circle
Crossref

Supplementary Tables S1-5 from METTL3-Mediated m<sup>6</sup>A Modification Controls Splicing Factor Abundance and Contributes to Aggressive CLL

2023-05-01 | Preprint
Contributors: Yiming Wu; Meiling Jin; Mike Fernandez; Kevyn L. Hart; Aijun Liao; Xinzhou Ge; Stacey M. Fernandes; Tinisha McDonald; Zhenhua Chen; Daniel Röth et al.
Source: check_circle
Crossref

Data from METTL3-Mediated m<sup>6</sup>A Modification Controls Splicing Factor Abundance and Contributes to Aggressive CLL

2023-04-17 | Preprint
Contributors: Yiming Wu; Meiling Jin; Mike Fernandez; Kevyn L. Hart; Aijun Liao; Xinzhou Ge; Stacey M. Fernandes; Tinisha McDonald; Zhenhua Chen; Daniel Röth et al.
Source: check_circle
Crossref

Supplementary Figures S1-8 from METTL3-Mediated m<sup>6</sup>A Modification Controls Splicing Factor Abundance and Contributes to Aggressive CLL

2023-04-17 | Preprint
Contributors: Yiming Wu; Meiling Jin; Mike Fernandez; Kevyn L. Hart; Aijun Liao; Xinzhou Ge; Stacey M. Fernandes; Tinisha McDonald; Zhenhua Chen; Daniel Röth et al.
Source: check_circle
Crossref

Supplementary Figures S1-8 from METTL3-Mediated m<sup>6</sup>A Modification Controls Splicing Factor Abundance and Contributes to Aggressive CLL

2023-04-17 | Preprint
Contributors: Yiming Wu; Meiling Jin; Mike Fernandez; Kevyn L. Hart; Aijun Liao; Xinzhou Ge; Stacey M. Fernandes; Tinisha McDonald; Zhenhua Chen; Daniel Röth et al.
Source: check_circle
Crossref

Supplementary Tables S1-5 from METTL3-Mediated m<sup>6</sup>A Modification Controls Splicing Factor Abundance and Contributes to Aggressive CLL

2023-04-17 | Preprint
Contributors: Yiming Wu; Meiling Jin; Mike Fernandez; Kevyn L. Hart; Aijun Liao; Xinzhou Ge; Stacey M. Fernandes; Tinisha McDonald; Zhenhua Chen; Daniel Röth et al.
Source: check_circle
Crossref

Supplementary Tables S1-5 from METTL3-Mediated m<sup>6</sup>A Modification Controls Splicing Factor Abundance and Contributes to Aggressive CLL

2023-04-17 | Preprint
Contributors: Yiming Wu; Meiling Jin; Mike Fernandez; Kevyn L. Hart; Aijun Liao; Xinzhou Ge; Stacey M. Fernandes; Tinisha McDonald; Zhenhua Chen; Daniel Röth et al.
Source: check_circle
Crossref

Wilcoxon rank-sum test still outperforms dearseq after accounting for the normalization impact in semi-synthetic RNA-seq data simulation

2022-06-09 | Preprint
Contributors: Yumei Li; Xinzhou Ge; Fanglue Peng; Wei Li; Jingyi Jessica Li
Source: check_circle
Crossref

APIR: Aggregating Universal Proteomics Database Search Algorithms for Peptide Identification with FDR Control

2021-09-10 | Preprint
Contributors: Yiling Elaine Chen; Xinzhou Ge; Kyla Woyshner; MeiLu McDermott; Antigoni Manousopoulou; Scott B. Ficarro; Jarrod A. Marto; Kexin Li; Leo David Wang; Jingyi Jessica Li
Source: check_circle
Crossref

A large-sample crisis? Exaggerated false positives by popular differential expression methods

2021-08-28 | Other
Contributors: Yumei Li; Xinzhou Ge; Fanglue Peng; Wei Li; Jingyi Jessica Li
Source: check_circle
Crossref

Clipper: p-value-free FDR control on high-throughput data from two conditions

2020-11-21 | Preprint
Contributors: Xinzhou Ge; Yiling Elaine Chen; Dongyuan Song; MeiLu McDermott; Kyla Woyshner; Antigoni Manousopoulou; Ning Wang; Wei Li; Leo D. Wang; Jingyi Jessica Li
Source: check_circle
Crossref

DORGE: Discovery of Oncogenes and tumoR suppressor genes using Genetic and Epigenetic features

Science Advances
2020-11-13 | Journal article
Contributors: Jie Lyu; Jingyi Jessica Li; Jianzhong Su; Fanglue Peng; Yiling Elaine Chen; Xinzhou Ge; Wei Li
Source: check_circle
Crossref

DORGE: Discovery of Oncogenes and Tumor SuppressoR Genes Using Genetic and Epigenetic Features

2020-07-22 | Preprint
Contributors: Jie Lyu; Jingyi Jessica Li; Jianzhong Su; Fanglue Peng; Yiling Chen; Xinzhou Ge; Wei Li
Source: check_circle
Crossref

DreamAI: algorithm for the imputation of proteomics data

2020-07-22 | Preprint
Contributors: Weiping Ma; Sunkyu Kim; Shrabanti Chowdhury; Zhi Li; Mi Yang; Seungyeul Yoo; Francesca Petralia; Jeremy Jacobsen; Jingyi Jessica Li; Xinzhou Ge et al.
Source: check_circle
Crossref

EpiAlign: an alignment-based bioinformatic tool for comparing chromatin state sequences

Nucleic Acids Research
2019-07-26 | Journal article
Contributors: Xinzhou Ge; Haowen Zhang; Lingjue Xie; Wei Vivian Li; Soo Bin Kwon; Jingyi Jessica Li
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Crossref

Peer review (1 review for 1 publication/grant)

Review activity for Patterns. (1)