Personal information

United Kingdom

Activities

Employment (3)

UK Health Security Agency: London, GB

2012-12 to present | Principal Clinical Scientist (Antiviral Unit, Virus Reference Department)
Employment
Source: Self-asserted source
David Bibby

Barts Health NHS Trust: London, London, GB

2007-03 to 2012-12 | Clinical Scientist (Virology)
Employment
Source: Self-asserted source
David Bibby

University College London: London, GB

2001-06 to 2006-07 | Post-doctoral Research Fellow (Virology)
Employment
Source: Self-asserted source
David Bibby

Education and qualifications (2)

University College London: London, GB

1997-10 to 2001-05 | Ph. D. (Virology)
Education
Source: Self-asserted source
David Bibby

Imperial College London: London, London, GB

1993-09 to 1997-06 | B. Sc. (Hons) Applied Biology (Biology)
Education
Source: Self-asserted source
David Bibby

Works (44)

Identification of two novel subtypes of hepatitis C virus genotype 8 and a potential new genotype successfully treated with direct acting antivirals

The Journal of Infectious Diseases
2024-05-08 | Journal article
Part of ISSN: 0022-1899
Part of ISSN: 1537-6613
Contributors: Jean Mbisa; Zena Lapp; David F Bibby; Laura T Phillips; Carmen F Manso; Simon Packer; Ruth Simmons; Kathryn Harris; Jaiganesh Mohan; Lalitha Chinnappan et al.
Source: Self-asserted source
David Bibby

Increased reports of severe myocarditis associated with enterovirus infection in neonates, United Kingdom, 27 June 2022 to 26 April 2023.

Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin
2023-09-01 | Journal article
Contributors: Anika Singanayagam; Moore C; Froude S; Celma C; Stowe J; Hani E; Ng KF; Muir P; Roderick M; Cottrell S et al.
Source: Self-asserted source
David Bibby

Clinical evaluation of a Hepatitis C Virus whole-genome sequencing pipeline for genotyping and resistance testing.

Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases
2021-07-07 | Journal article
Source: Self-asserted source
David Bibby

Real world SOF/VEL/VOX retreatment outcomes and viral resistance analysis for HCV patients with prior failure to DAA therapy.

Journal of viral hepatitis
2021-05-18 | Journal article
Source: Self-asserted source
David Bibby

Surveillance of HIV-1 transmitted integrase strand transfer inhibitor resistance in the UK.

The Journal of antimicrobial chemotherapy
2020-11-01 | Journal article
Source: Self-asserted source
David Bibby

Technical Validation of a Hepatitis C Virus Whole Genome Sequencing Assay for Detection of Genotype and Antiviral Resistance in the Clinical Pathway.

Frontiers in microbiology
2020-10-09 | Journal article
Source: Self-asserted source
David Bibby

Enhanced Detection of DNA Viruses in the Cerebrospinal Fluid of Encephalitis Patients Using Metagenomic Next-Generation Sequencing

Frontiers in Microbiology
2020-08-12 | Journal article
Part of ISSN: 1664-302X
Source: Self-asserted source
David Bibby

Multi-Laboratory Comparison of Next-Generation to Sanger-Based Sequencing for HIV-1 Drug Resistance Genotyping

Viruses
2020-06-27 | Journal article
Contributors: Neil T. Parkin; Santiago Avila-Rios; David F. Bibby; Chanson J. Brumme; Susan H. Eshleman; P. Richard Harrigan; Mark Howison; Gillian Hunt; Hezhao Ji; Rami Kantor et al.
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Interpreting Viral Deep Sequencing Data with GLUE.

Viruses
2019-04 | Journal article
Contributors: Singer JB; Thomson EC; Hughes J; Aranday-Cortes E; McLauchlan J; da Silva Filipe A; Tong L; Manso CF; Gifford RJ; Robertson DL et al.
Source: Self-asserted source
David Bibby via Europe PubMed Central

Presence, persistence and effects of pre-treatment HIV-1 drug resistance variants detected using next generation sequencing: A Retrospective longitudinal study from rural coastal Kenya.

PloS one
2019-02 | Journal article
Contributors: Hassan AS; Bibby DF; Mwaringa SM; Agutu CA; Ndirangu KK; Sanders EJ; Cane PA; Mbisa JL; Berkley JA
Source: Self-asserted source
David Bibby via Europe PubMed Central

Determining the Origins of Human Immunodeficiency Virus Type 1 Drug-resistant Minority Variants in People Who Are Recently Infected Using Phylogenetic Reconstruction

Clinical Infectious Diseases
2018-12-11 | Journal article
Part of ISSN: 1058-4838
Part of ISSN: 1537-6591
Source: Self-asserted source
David Bibby

A European multi-centre External Quality Assessment (EQA) study on phenotypic and genotypic methods used for Herpes Simplex Virus (HSV) drug resistance testing.

Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology
2017-10 | Journal article
Contributors: Afshar B; Bibby DF; Piorkowska R; Ohemeng-Kumi N; Snoeck R; Andrei G; Gillemot S; Morfin F; Frobert E; Burrel S et al.
Source: Self-asserted source
David Bibby via Europe PubMed Central

Efficient and unbiased metagenomic recovery of RNA virus genomes from human plasma samples

Scientific Reports
2017-06-23 | Journal article
Contributors: Carmen F. Manso; David F. Bibby; Jean L. Mbisa
Source: check_circle
Crossref

Comparison of Next-Generation Sequencing Technologies for Comprehensive Assessment of Full-Length Hepatitis C Viral Genomes

Journal of Clinical Microbiology
2016-10 | Journal article
Contributors: Emma Thomson; Camilla L. C. Ip; Anjna Badhan; Mette T. Christiansen; Walt Adamson; M. Azim Ansari; David Bibby; Judith Breuer; Anthony Brown; Rory Bowden et al.
Source: check_circle
Crossref

Enhanced surveillance of HIV-1 drug resistance in recently infected MSM in the UK.

The Journal of antimicrobial chemotherapy
2016-10 | Journal article
Contributors: Cunningham E; Chan YT; Aghaizu A; Bibby DF; Murphy G; Tosswill J; Harris RJ; Myers R; Field N; Delpech V et al.
Source: Self-asserted source
David Bibby via Europe PubMed Central

The seroprevalence and salivary shedding of herpesviruses in Behcet's syndrome and recurrent aphthous stomatitis.

2015 | Journal article
Contributors: Seoudi N; Bergmeier LA; Hagi-Pavli E; Bibby D; Fortune F
Source: Self-asserted source
David Bibby via Europe PubMed Central

Evidence of Self-Sustaining Drug Resistant HIV-1 Lineages Among Untreated Patients in the United Kingdom.

2015-09 | Journal article
Contributors: Mbisa JL; Fearnhill E; Dunn DT; Pillay D; Asboe D; Cane PA; UK HIV Drug Resistance Database
Source: Self-asserted source
David Bibby via Europe PubMed Central

Phylogenetic analyses reveal HIV-1 infections between men misclassified as heterosexual transmissions.

2014-08 | Journal article
Contributors: Hué S; Brown AE; Ragonnet-Cronin M; Lycett SJ; Dunn DT; Fearnhill E; Dolling DI; Pozniak A; Pillay D; Delpech VC et al.
Source: Self-asserted source
David Bibby via Europe PubMed Central

The increasing genetic diversity of HIV-1 in the UK, 2002-2010.

2014-03 | Journal article
Contributors: UK Collaborative Group on HIV Drug Resistance
Source: Self-asserted source
David Bibby via Europe PubMed Central

The emergence of drug resistant HIV variants at virological failure of HAART combinations containing efavirenz, tenofovir and lamivudine or emtricitabine within the UK Collaborative HIV Cohort.

2014-01 | Journal article
Contributors: Bulteel N; Bansi-Matharu L; Churchill D; Dunn D; Bibby D; Hill T; Sabin C; Nelson M; UK Collaborative HIV Cohort (CHIC) Study Group; UK HIV Drug Resistance Database (UK HDRD) Study Group
Source: Self-asserted source
David Bibby via Europe PubMed Central

Persistence of HIV-1 transmitted drug resistance mutations.

2013-11 | Journal article
Contributors: Castro H; Pillay D; Cane P; Asboe D; Cambiano V; Phillips A; Dunn DT; UK Collaborative Group on HIV Drug Resistance
Source: Self-asserted source
David Bibby via Europe PubMed Central

Low frequency of genotypic resistance in HIV-1-infected patients failing an atazanavir-containing regimen: a clinical cohort study.

2013-10 | Journal article
Contributors: Dolling DI; Dunn DT; Sutherland KA; Pillay D; Mbisa JL; Parry CM; Post FA; Sabin CA; Cane PA; UK HIV Drug Resistance Database (UKHDRD) et al.
Source: Self-asserted source
David Bibby via Europe PubMed Central

The impact of HIV-1 reverse transcriptase polymorphisms on responses to first-line nonnucleoside reverse transcriptase inhibitor-based therapy in HIV-1-infected adults.

2013-09 | Journal article
Contributors: Mackie NE; Dunn DT; Dolling D; Garvey L; Harrison L; Fearnhill E; Tilston P; Sabin C; Geretti AM; UK HIV Drug Resistance Database et al.
Source: Self-asserted source
David Bibby via Europe PubMed Central

The role of TLR2 and 4 in Behcet's disease pathogenesis.

2013-08 | Journal article
PMID:

23940075

Contributors: Bergmeier LA; Bibby D; Curtis MA; Fortune F; Hagi-Pavli E; Seoudi N
Source: Self-asserted source
David Bibby via Europe PubMed Central

Declining prevalence of HIV-1 drug resistance in antiretroviral treatment-exposed individuals in Western Europe.

2013-04 | Journal article
Contributors: De Luca A; Dunn D; Zazzi M; Camacho R; Torti C; Fanti I; Kaiser R; Sönnerborg A; Codoñer FM; Van Laethem K et al.
Source: Self-asserted source
David Bibby via Europe PubMed Central

Effect of misclassification of antiretroviral treatment status on the prevalence of transmitted HIV-1 drug resistance.

2012 | Journal article
Contributors: Castro H; Pillay D; Sabin C; Dunn DT; UK Collaborative Group on HIV Drug Resistance
Source: Self-asserted source
David Bibby via Europe PubMed Central

Time trends in drug resistant HIV-1 infections in the United Kingdom up to 2009: multicentre observational study.

2012 | Journal article
Contributors: UK Collaborative Group on HIV Drug Resistance; Dolling D; Sabin C; Delpech V; Smit E; Pozniak A; Asboe D; Brown AL; Churchill D; Williams I et al.
Source: Self-asserted source
David Bibby via Europe PubMed Central

Disease Progression in HIV-1-Infected Viremic Controllers.

2012-12 | Journal article
DOI:

10.1097/QAI.0b013e318269c414

PMID:

22902723

PMC:

PMC3736311

Contributors: Anderson J; Bibby DF; Clark DA; Deayton JR; Groves KC; Isaksen A; McKnight A; Orkin C; Stagg AJ
Source: Self-asserted source
David Bibby via Europe PubMed Central

Frequency and patterns of protease gene resistance mutations in HIV-infected patients treated with lopinavir/ritonavir as their first protease inhibitor.

2012-04 | Journal article
Contributors: Barber TJ; Harrison L; Asboe D; Williams I; Kirk S; Gilson R; Bansi L; Pillay D; Dunn D; UK HIV Drug Resistance Database and UK Collaborative HIV Cohort (UK CHIC) Study Steering Committees
Source: Self-asserted source
David Bibby via Europe PubMed Central

A MIQE-compliant real-time PCR assay for Aspergillus detection.

2012 | Journal article
DOI:

10.1371/journal.pone.0040022

PMID:

22808087

PMC:

PMC3393739

Contributors: Agrawal SG; Bibby DF; Bustin SA; Johnson GL; Wong S
Source: Self-asserted source
David Bibby via Europe PubMed Central

Comparative evaluation of the Seegene Seeplex RV15 and real-time PCR for respiratory virus detection.

2011-08 | Journal article
DOI:

10.1002/jmv.22125

PMID:

21678451

Contributors: Bibby DF; Breuer J; Clark DA; McElarney I
Source: Self-asserted source
David Bibby via Europe PubMed Central

Detection of drug resistance mutations at low plasma HIV-1 RNA load in a European multicentre cohort study.

2011-08 | Journal article
Contributors: Prosperi MC; Mackie N; Di Giambenedetto S; Zazzi M; Camacho R; Fanti I; Torti C; Sönnerborg A; Kaiser R; Codoñer FM et al.
Source: Self-asserted source
David Bibby via Europe PubMed Central

Nosocomial transmission of parainfluenza 3 virus in hematological patients characterized by molecular epidemiology.

2011-08 | Journal article
DOI:

10.1111/j.1399-3062.2011.00603.x

PMID:

21466639

Contributors: Bibby DF; Clark DA; Lee AV; Mattes FM; Oakervee H; Rohatiner A; Ushiro-Lumb I
Source: Self-asserted source
David Bibby via Europe PubMed Central

Epidemiology of non-B clade forms of HIV-1 in men who have sex with men in the UK.

2010-09 | Journal article
Contributors: Fox J; Castro H; Kaye S; McClure M; Weber JN; Fidler S; UK Collaborative Group on HIV Drug Resistance
Source: Self-asserted source
David Bibby via Europe PubMed Central

The effect of transmitted HIV-1 drug resistance on pre-therapy viral load.

2010-07 | Journal article
Contributors: Harrison L; Castro H; Cane P; Pillay D; Booth C; Phillips A; Geretti AM; Dunn D; UK Collaborative Group on HIV Drug Resistance and the UK Collaborative HIV Cohort Study (UK CHIC)
Source: Self-asserted source
David Bibby via Europe PubMed Central

Techniques for the investigation of the relative fitnesses of Human Immunodeficiency Virus type 1 reverse transcriptase domains.

2010-06 | Dissertation/Thesis
OTHER-ID:

397309

Contributors: Bibby DF
Source: Self-asserted source
David Bibby via Europe PubMed Central

Long-term probability of detecting drug-resistant HIV in treatment-naive patients initiating combination antiretroviral therapy.

2010-05 | Journal article
Contributors: UK Collaborative Group on HIV Drug Resistance; UK CHIC Study Group
Source: Self-asserted source
David Bibby via Europe PubMed Central

P16-21. Altered T cell homeostasis and activation in HIV-1 elite suppressors with low CD4+ T-cell counts.

2009 | Journal article
Contributors: Groves K; Bibby D; Isaksen A; Deayton J; Anderson J; Orkin C; Stagg A; McKnight Á
Source: Self-asserted source
David Bibby via Europe PubMed Central

Inadvertent non-nucleoside reverse transcriptase inhibitor (NNRTI)-based antiretroviral therapy in dual HIV-1/2 and HIV-2 seropositive West Africans: a retrospective study.

2009-09 | Journal article
DOI:

10.1093/jac/dkp216

PMID:

19549668

Contributors: Appiah LT; Bibby DF; Chadwick DR; Clark DA; Collini P; Dittmar MT; Green I; Phillips R; Sarfo FS; Schwab U
Source: Self-asserted source
David Bibby via Europe PubMed Central

Sustained immunological responses to highly active antiretroviral therapy at 36 months in a Ghanaian HIV cohort.

2009-04 | Journal article
DOI:

10.1086/597353

PMID:

19231976

Contributors: Bedu-Addo G; Bibby D; Chadwick D; Collini P; Norman B; Obeng-Baah J; Sarfo S; Schwab U
Source: Self-asserted source
David Bibby via Europe PubMed Central

Application of a novel in vitro selection technique to isolate and characterise high affinity DNA aptamers binding mammalian prion proteins.

2008-07 | Journal article
DOI:

10.1016/j.jviromet.2008.03.013

PMID:

18433888

Contributors: Bibby DF; Bruce ME; Farquhar CF; Garson JA; Gill AC; Kirby L
Source: Self-asserted source
David Bibby via Europe PubMed Central

Molecular epidemiology of genital human papillomavirus and Chlamydia trachomatis among patients attending a genitourinary medicine clinic - will vaccines protect?

2007-09 | Journal article
DOI:

10.1258/095646207781568501

PMID:

17785006

Contributors: Bibby DF; Carne CA; Jalal H; Sonnex C; Stephen H
Source: Self-asserted source
David Bibby via Europe PubMed Central

Molecular investigations of an outbreak of parainfluenza virus type 3 and respiratory syncytial virus infections in a hematology unit.

2007-06 | Journal article
DOI:

10.1128/JCM.01912-06

PMID:

17392447

PMC:

PMC1933051

Contributors: Bennett J; Bibby DF; Brink NS; Jalal H; MacKinnon S; Sampson RE; Tedder RS; Ward KN
Source: Self-asserted source
David Bibby via Europe PubMed Central

First reported outbreak of diarrhea due to adenovirus infection in a hematology unit for adults.

2005-06 | Journal article
DOI:

10.1128/JCM.43.6.2575-2580.2005

PMID:

15956366

PMC:

PMC1151909

Contributors: Bennett J; Bibby DF; Brink NS; Cubitt D; Jalal H; Kyriakou C; Peggs K; Tang JW; Tedder RS; Ward KN
Source: Self-asserted source
David Bibby via Europe PubMed Central

Peer review (6 reviews for 3 publications/grants)

Review activity for Journal of clinical virology. (2)
Review activity for PloS one. (1)
Review activity for Viruses. (3)