Personal information

genome informatics, bioinformatics, genomics, genome annotation
United States

Biography

Husband, father, scholar, aspiring scientist, avid programmer, lapsed musician, flipper of pancakes, baker of biscuits.

Activities

Employment (1)

University of California Davis: Davis, CA, US

2016-08 to 2018-08 | Postdoctoral scholar
Employment
Source: Self-asserted source
Daniel S. Standage

Education and qualifications (2)

Iowa State University: Ames, IA, US

2010-08 to 2016-05 | Ph.D. Bioinformatics and Computational Biology
Education
Source: Self-asserted source
Daniel S. Standage

Brigham Young University: Provo, UT, US

2003-09 to 2010-04 | B.S. Bioinformatics
Education
Source: Self-asserted source
Daniel S. Standage

Works (10)

Empirical haplotype calling and probabilistic interpretation of microhaplotype profiles

Forensic Science International: Genetics Supplement Series
2022-12 | Journal article
Contributors: Daniel Standage; Rebecca Just; Curt Scharfe; Neeru Gandotra
Source: check_circle
Crossref

iLoci: Robust evaluation of genome content and organization for provisional and mature genome assemblies

2021-10-04 | Preprint
Contributors: Daniel S Standage; Tim Lai; Volker P Brendel
Source: check_circle
Crossref

MicroHapDB: a portable and extensible database of all published microhaplotype marker and frequency data

2020-04-09 | Preprint
Contributors: Daniel Standage; Rebecca Mitchell
Source: check_circle
Crossref

Kevlar: A Mapping-Free Framework for Accurate Discovery of De Novo Variants

iScience
2019-08 | Journal article
Part of ISSN: 2589-0042
Source: Self-asserted source
Daniel S. Standage
grade
Preferred source (of 2)‎

khmer release v2.1: software for biological sequence analysis

The Journal of Open Source Software
2017-07-03 | Journal article
Contributors: Daniel Standage; Ali yari; Lisa J. Cohen; Michael R. Crusoe; Tim Head; Luiz Irber; Shannon EK Joslin; N. B. Kingsley; Kevin D. Murray; Russell Neches et al.
Source: Self-asserted source
Daniel S. Standage via Crossref Metadata Search
grade
Preferred source (of 2)‎

Genome, transcriptome and methylome sequencing of a primitively eusocial wasp reveal a greatly reduced DNA methylation system in a social insect

Mol Ecol
2016-03 | Journal article
Contributors: Daniel S. Standage; Ali J. Berens; Karl M. Glastad; Andrew J. Severin; Volker P. Brendel; Amy L. Toth
Source: Self-asserted source
Daniel S. Standage via Crossref Metadata Search

xGDBvm: A Web GUI-driven workflow for annotating eukaryotic genomes in the cloud

Plant Cell
2016-03 | Journal article
Contributors: Jon Duvick; Daniel S Standage; Nirav Merchant; Volker P Brendel
Source: Self-asserted source
Daniel S. Standage via Crossref Metadata Search
grade
Preferred source (of 2)‎

The khmer software package: enabling efficient nucleotide sequence analysis

F1000Res
2015-09 | Journal article
Contributors: Michael R. Crusoe; Hussien F. Alameldin; Sherine Awad; Elmar Boucher; Adam Caldwell; Reed Cartwright; Amanda Charbonneau; Bede Constantinides; Greg Edvenson; Scott Fay et al.
Source: Self-asserted source
Daniel S. Standage via Crossref Metadata Search
grade
Preferred source (of 2)‎

ParsEval: parallel comparison and analysis of gene structure annotations

2012 | Journal article
DOI:

10.1186/1471-2105-13-187

Source: Self-asserted source
Daniel S. Standage

TAL Effector-Nucleotide Targeter (TALE-NT) 2.0: Tools for TAL effector design and target prediction

2012-06-12 | Journal article
DOI:

10.1093/nar/gks608

Source: Self-asserted source
Daniel S. Standage