Personal information

Japan

Activities

Employment (6)

Graduate School of Medicine, Gifu University: Gifu, Gifu, JP

2017-05-01 to present | Associate Professor (Department of Microbiology)
Employment
Source: Self-asserted source
Tomoko Kubori

Research Institute for Microbial Diseases, Osaka University: Suita, Osaka, JP

2004-08-01 to 2017-04-31 | SA Assistant Professor, SA Associate Professor (Department of Infectious Disease Control)
Employment
Source: Self-asserted source
Tomoko Kubori

Yale University School of Medicine: New Haven, CT, US

1994-04-01 to 2004-07-31 | HFSP fellow, Postdoctoral Associate, Associate Research Scientist (Section of Microbial Pathogenesis)
Employment
Source: Self-asserted source
Tomoko Kubori

National Institute of Genetics: Mishima, Shizuoka, JP

1993-04-01 to 1999-03-31 | JSPS fellow, Associate in Research
Employment
Source: Self-asserted source
Tomoko Kubori

ERATO, Molecular Dynamic Assembly Project: Tsukuba, Ibaraki, JP

1986-04-01 to 1991-03-31 | Associate in Research
Employment
Source: Self-asserted source
Tomoko Kubori

Matsushita Electric Industrial Co., Ltd: Moriguchi, Osaka, JP

1985-04-01 to 1986-03-31 | Researcher (Illumination Engineering)
Employment
Source: Self-asserted source
Tomoko Kubori

Education and qualifications (2)

The Graduate University for Advanced Studies: Mishima, Shizuoka, JP

1991-04-01 to 1994-02-28 | Ph. D. (Department of Genetics)
Education
Source: Self-asserted source
Tomoko Kubori

Osaka University: Suita, Osaka, JP

1981-04-01 to 1985-03-31 | Bachelor of Science (Department of Biophysical Engineering)
Education
Source: Self-asserted source
Tomoko Kubori

Funding (12)

Analysis of bacterial effector proteins that control the host ubiquitin system to negative

Source: Self-asserted source
Tomoko Kubori via DimensionsWizard
grade
Preferred source (of 2)‎

Possibility of ubiquitin lipid binding to induce Zenofaji

2016-04-01 to 2018-03-31 | Grant
Japan Society for the Promotion of Science (Tokyo, JP)
GRANT_NUMBER: 16K14724
Source: Self-asserted source
Tomoko Kubori via DimensionsWizard
grade
Preferred source (of 2)‎

All structural analysis of pathogenic type IV secretion Machinery

2015-04-01 to 2017-03-31 | Grant
Japan Society for the Promotion of Science (Tokyo, JP)
GRANT_NUMBER: 15H01322
Source: Self-asserted source
Tomoko Kubori via DimensionsWizard
grade
Preferred source (of 2)‎

Molecular basis of evasion of Legionella from xenophagy

2014-04-01 to 2016-03-31 | Grant
Japan Society for the Promotion of Science (Tokyo, JP)
GRANT_NUMBER: 26670212
Source: Self-asserted source
Tomoko Kubori via DimensionsWizard
grade
Preferred source (of 2)‎

Structural analysis and assembly pathway of the pathogenic bacterial type IVB secretion system transport channel

Source: Self-asserted source
Tomoko Kubori via DimensionsWizard
grade
Preferred source (of 2)‎

Interaction and function of Legionella effector and the host factors

2007-01-01 to 2008-12-31 | Grant
Japan Society for the Promotion of Science (Tokyo, JP)
GRANT_NUMBER: 19041043
Source: Self-asserted source
Tomoko Kubori via DimensionsWizard
grade
Preferred source (of 2)‎

Functional analysis of Legionella Dot/Icm T4SS component DotA.

2006-01-01 to 2007-12-31 | Grant
Japan Society for the Promotion of Science (Tokyo, JP)
GRANT_NUMBER: 18590420
Source: Self-asserted source
Tomoko Kubori via DimensionsWizard
grade
Preferred source (of 2)‎

Molecular mechanisms of phagosome modification by Legionella

2006-01-01 to 2007-12-31 | Grant
Japan Society for the Promotion of Science (Tokyo, JP)
GRANT_NUMBER: 18050022
Source: Self-asserted source
Tomoko Kubori via DimensionsWizard
grade
Preferred source (of 2)‎

Structure formation and the working mechanism of the Legionella type IV secretion apparatus

Source: Self-asserted source
Tomoko Kubori via DimensionsWizard
grade
Preferred source (of 2)‎

Molecular analysis of the Legionella typeIV secretion system

2005-01-01 to 2006-12-31 | Grant
Japan Society for the Promotion of Science (Tokyo, JP)
GRANT_NUMBER: 17590390
Source: Self-asserted source
Tomoko Kubori via DimensionsWizard
grade
Preferred source (of 2)‎

Analysis of type IV secretion system by the transport mechanism of Legionella membrane protein DotA

Source: Self-asserted source
Tomoko Kubori via DimensionsWizard
grade
Preferred source (of 2)‎

TYPE III EXPORT SYSTEM ; STRUCTURAL ANALYSIS OF FLAGELLA-SPECIFIC EXPORT APPARATUS OF BACTERIA

Source: Self-asserted source
Tomoko Kubori via DimensionsWizard
grade
Preferred source (of 2)‎

Works (50 of 62)

Items per page:
Page 1 of 2

Subversion of the host endocytic pathway by Legionella pneumophila-mediated ubiquitination of Rab5

2025-01-10 | Other
Contributors: Shino Tanaka; Hiromu Oide; Shumma Ikeda; Mitsuo Tagaya; Hiroki Nagai; Tomoko Kubori; Kohei Arasaki
Source: check_circle
Crossref

Cleavage cascade of the sigma regulator FecR orchestrates TonB-dependent signal transduction

2025-01-08 | Preprint
Contributors: Tatsuhiko Yokoyama; Ryoji Miyazaki; Takehiro Suzuki; Naoshi Dohmae; Hiroki Nagai; Tomoya Tsukazaki; Tomoko Kubori; Yoshinori Akiyama
Source: check_circle
Crossref

Bacterial usurpation of the OTU deubiquitinase fold

The FEBS Journal
2024-08 | Journal article
Contributors: Jonathan N. Pruneda; Justine V. Nguyen; Hiroki Nagai; Tomoko Kubori
Source: check_circle
Crossref

Multi-tiered actions of Legionella effectors to modulate host Rab10 dynamics

eLife
2024-05-21 | Journal article
Contributors: Tomoko Kubori; Kohei Arasaki; Hiromu Oide; Tomoe Kitao; Hiroki Nagai
Source: check_circle
Crossref

Multi-tiered actions of Legionella effectors to modulate host Rab10 dynamics

eLife
2024-05-21 | Journal article
Contributors: Tomoko Kubori; Kohei Arasaki; Hiromu Oide; Tomoe Kitao; Hiroki Nagai
Source: check_circle
Crossref

Multi-tiered actions of Legionella effectors to modulate host Rab10 dynamics

2024-04-15 | Preprint
Contributors: Tomoko Kubori; Kohei Arasaki; Hiromu Oide; Tomoe Kitao; Hiroki Nagai
Source: check_circle
Crossref

A two-component system serves as a central hub for connecting energy metabolism and plasmid dissemination in bacteria

mBio
2023-12-19 | Journal article
Contributors: Tomoko Kubori; Nancy E. Freitag
Source: check_circle
Crossref

Multi-tiered actions of Legionella effectors to modulate host Rab10 dynamics

2023-08-08 | Preprint
Contributors: Tomoko Kubori; Kohei Arasaki; Tomoe Kitao; Hiroki Nagai
Source: check_circle
Crossref

Multi-tiered actions ofLegionellaeffectors to modulate host Rab10 dynamics

2023-06-03 | Preprint
Contributors: Tomoko Kubori; Kohei Arasaki; Hiromu Oide; Tomoe Kitao; Hiroki Nagai
Source: check_circle
Crossref

Synthetic engineering and biological containment of bacteriophages

Proceedings of the National Academy of Sciences
2022-11-29 | Journal article
Contributors: Shoichi Mitsunaka; Kohei Yamazaki; Ajeng K. Pramono; Megumi Ikeuchi; Tomoe Kitao; Naoya Ohara; Tomoko Kubori; Hiroki Nagai; Hiroki Ando
Source: check_circle
Crossref

Reversible modification of mitochondrial ADP/ATP translocases by paired Legionella effector proteins

Proceedings of the National Academy of Sciences
2022-06-07 | Journal article
Contributors: Tomoko Kubori; Junyup Lee; Hyunmin Kim; Kohei Yamazaki; Masanari Nishikawa; Tomoe Kitao; Byung-Ha Oh; Hiroki Nagai
Source: check_circle
Crossref

Mechanism of Lys6 poly-ubiquitin specificity by the L. pneumophila deubiquitinase LotA

2022-05-11 | Preprint
Contributors: Gus D. Warren; Tomoe Kitao; Tyler G. Franklin; Justine V. Nguyen; Paul P. Geurink; Tomoko Kubori; Hiroki Nagai; Jonathan N. Pruneda
Source: check_circle
Crossref

Recent advances in structural studies of the Legionella pneumophila Dot/Icm type IV secretion system

Microbiology and Immunology
2022-02 | Journal article
Contributors: Tomoe Kitao; Tomoko Kubori; Hiroki Nagai
Source: check_circle
Crossref

Structural Basis of Ubiquitin Recognition by a Bacterial Ovarian Tumor Deubiquitinase LotA

Journal of Bacteriology
2022-01-18 | Journal article
Contributors: Norihiro Takekawa; Tomoko Kubori; Tomoya Iwai; Hiroki Nagai; Katsumi Imada; Julie A. Maupin-Furlow
Source: check_circle
Crossref

Staphylococcal Phage in Combination with Staphylococcus epidermidis as a Potential Treatment for Staphylococcus aureus-Associated Atopic Dermatitis and Suppressor of Phage-Resistant Mutants

Viruses
2020-12-22 | Journal article
Contributors: Yuzuki Shimamori; Shoichi Mitsunaka; Hirotaka Yamashita; Tohru Suzuki; Tomoe Kitao; Tomoko Kubori; Hiroki Nagai; Shigeki Takeda; Hiroki Ando
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Legionella Manipulates Non-canonical SNARE Pairing Using a Bacterial Deubiquitinase

Cell Reports
2020-09 | Journal article
Contributors: Tomoe Kitao; Kyoichiro Taguchi; Shintaro Seto; Kohei Arasaki; Hiroki Ando; Hiroki Nagai; Tomoko Kubori
Source: check_circle
Crossref

Divergence of Legionella Effectors Reversing Conventional and Unconventional Ubiquitination

Frontiers in Cellular and Infection Microbiology
2020-08-21 | Journal article
Part of ISSN: 2235-2988
Source: Self-asserted source
Tomoko Kubori

Emerging insights into bacterial deubiquitinases

Current Opinion in Microbiology
2019-02 | Journal article
Contributors: Tomoko Kubori; Tomoe Kitao; Hiroki Nagai
Source: check_circle
Crossref

LotA, a Legionella deubiquitinase, has dual catalytic activity and contributes to intracellular growth

Cellular Microbiology
2018-07-06 | Journal article
Contributors: Tomoko Kubori; Tomoe Kitao; Hiroki Ando; Hiroki Nagai
Source: check_circle
Crossref

Isolation of the Dot/Icm Type IV Secretion System Core Complex from Legionella pneumophila for Negative Stain Electron Microscopy Studies

BIO-PROTOCOL
2017 | Journal article
Contributors: Tomoko Kubori; Hiroki Nagai
Source: Self-asserted source
Tomoko Kubori via Crossref Metadata Search

Legionella RavZ Plays a Role in Preventing Ubiquitin Recruitment to Bacteria-Containing Vacuoles

Frontiers in Cellular and Infection Microbiology
2017-08 | Journal article
Contributors: Tomoko Kubori; Xuan T. Bui; Andree Hubber; Hiroki Nagai
Source: Self-asserted source
Tomoko Kubori via Crossref Metadata Search

Bacterial secretion system skews the fate of Legionella-containing vacuoles towards LC3-associated phagocytosis

Scientific Reports
2017-03 | Journal article
Contributors: Andree Hubber; Tomoko Kubori; Cevayir Coban; Takeshi Matsuzawa; Michinaga Ogawa; Tsuyoshi Kawabata; Tamotsu Yoshimori; Hiroki Nagai
Source: Self-asserted source
Tomoko Kubori via Crossref Metadata Search

Microbially cleaved immunoglobulins are sensed by the innate immune receptor LILRA2.

2016 | Journal article
Contributors: Hirayasu K; Saito F; Suenaga T; Shida K; Arase N; Oikawa K; Yamaoka T; Murota H; Chibana H; Nakagawa I et al.
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central

Life with Bacterial Secretion Systems.

2016-08 | Journal article
Contributors: Kubori T
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central
grade
Preferred source (of 2)‎

The Type IVB secretion system: an enigmatic chimera.

2016-02 | Journal article
Contributors: Kubori T; Nagai H
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central

Molecular and structural analysis of Legionella DotI gives insights into an inner membrane complex essential for type IV secretion.

2015 | Journal article
Contributors: Kuroda T; Kubori T; Thanh Bui X; Hyakutake A; Uchida Y; Imada K; Nagai H
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central

Structure of a periplasmic fragment of TraM

2015-06-10 | Other
Contributors: T. Kuroda; T. Kubori; Y. Uchida; H. Nagai; K. Imada
Source: Self-asserted source
Tomoko Kubori via Crossref Metadata Search

Structure of the periplasmic domain of DotI (crystal form I)

2015-06-10 | Other
Contributors: T. Kuroda; T. Kubori; Y. Uchida; H. Nagai; K. Imada
Source: Self-asserted source
Tomoko Kubori via Crossref Metadata Search

Structure of the periplasmic domain of DotI (crystal form II)

2015-06-10 | Other
Contributors: T. Kuroda; T. Kubori; Y. Uchida; H. Nagai; K. Imada
Source: Self-asserted source
Tomoko Kubori via Crossref Metadata Search

Hijacking the host proteasome for the temporal degradation of bacterial effectors.

2014 | Journal article
Contributors: Kubori T; Hubber AM; Nagai H
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central

Native structure of a type IV secretion system core complex essential for Legionella pathogenesis.

2014-08 | Journal article
Contributors: Kubori T; Koike M; Bui XT; Higaki S; Aizawa S; Nagai H
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central

Modulation of the ubiquitination machinery by Legionella.

2013 | Journal article
Contributors: Hubber A; Kubori T; Nagai H
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central

Purification and characterization of legionella U-box-type E3 ubiquitin ligase.

2013 | Journal article
Contributors: Nagai H; Kubori T
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central

2PT124 Legionella DotI and DotJ form a multimeric subcomplex associated with the core complex of the Dot/Icm type IVB secretion system(The 50th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri
2012 | Journal article
Contributors: Tomoko Kubori; Takuya Kuroda; Katsumi Imada; Hiroki Nagai
Source: Self-asserted source
Tomoko Kubori via Crossref Metadata Search

Bacterial effector-involved temporal and spatial regulation by hijack of the host ubiquitin pathway.

2011 | Journal article
Contributors: Kubori T; Nagai H
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central

Type IVB Secretion Systems of Legionella and Other Gram-Negative Bacteria.

2011 | Journal article
Contributors: Nagai H; Kubori T
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central

Crystal structure of Legionella DotD: insights into the relationship between type IVB and type II/III secretion systems.

2010 | Journal article
Contributors: Nakano N; Kubori T; Kinoshita M; Imada K; Nagai H
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central

Legionella metaeffector exploits host proteasome to temporally regulate cognate effector.

2010 | Journal article
Contributors: Kubori T; Shinzawa N; Kanuka H; Nagai H
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central

Crystal structure of DotD from Legionella

2010-11-03 | Other
Contributors: K. Imada; N. Nakano; T. Kubori; M. Kinoshita; H. Nagai
Source: Self-asserted source
Tomoko Kubori via Crossref Metadata Search

Legionella translocates an E3 ubiquitin ligase that has multiple U-boxes with distinct functions.

2008-03 | Journal article
Contributors: Kubori T; Hyakutake A; Nagai H
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central

Assembly of the inner rod determines needle length in the type III secretion injectisome

Nature
2006-06-01 | Journal article
Contributors: Thomas C. Marlovits; Tomoko Kubori; María Lara-Tejero; Dennis Thomas; Vinzenz M. Unger; Jorge E. Galán
Source: Self-asserted source
Tomoko Kubori via Crossref Metadata Search

A pathway branching in transcription initiation in Escherichia coli.

2006-03 | Journal article
Contributors: Susa M; Kubori T; Shimamoto N
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central

Disruption of type III secretion in Salmonella enterica serovar Typhimurium by external guide sequences.

2004 | Journal article
Contributors: McKinney JS; Zhang H; Kubori T; Galán JE; Altman S
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central

Structural insights into the assembly of the type III secretion needle complex.

2004-11 | Journal article
Contributors: Marlovits TC; Kubori T; Sukhan A; Thomas DR; Galán JE; Unger VM
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central

Temporal regulation of salmonella virulence effector function by proteasome-dependent protein degradation.

2003-10 | Journal article
Contributors: Kubori T; Galán JE
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central
grade
Preferred source (of 2)‎

Synthesis and localization of the Salmonella SPI-1 type III secretion needle complex proteins PrgI and PrgJ.

2003-06 | Journal article
Contributors: Sukhan A; Kubori T; Galán JE
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central

Molecular and functional analysis of the type III secretion signal of the Salmonella enterica InvJ protein.

2002-11 | Journal article
Contributors: Rüssmann H; Kubori T; Sauer J; Galán JE
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central

Salmonella type III secretion-associated protein InvE controls translocation of effector proteins into host cells.

2002-09 | Journal article
Contributors: Kubori T; Galán JE
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central
grade
Preferred source (of 2)‎

Genetic analysis of assembly of the Salmonella enterica serovar Typhimurium type III secretion-associated needle complex.

2001-02 | Journal article
Contributors: Sukhan A; Kubori T; Wilson J; Galán JE
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central

Molecular characterization and assembly of the needle complex of the Salmonella typhimurium type III protein secretion system.

2000-08 | Journal article
Contributors: Kubori T; Sukhan A; Aizawa SI; Galán JE
Source: Self-asserted source
Tomoko Kubori via Europe PubMed Central
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Page 1 of 2

Peer review (11 reviews for 7 publications/grants)

Review activity for Biomolecules. (1)
Review activity for Cell reports. (1)
Review activity for eLife (3)
Review activity for European journal of cell biology. (2)
Review activity for Nature communications (2)
Review activity for PLOS pathogens : (1)
Review activity for Trends in microbiology (1)