Personal information

Plant mitochondria, Gene expression, RNA biology, Pentatricopeptide repeat (PPR) proteins, RNase P, Translation, Mitoribosome
France

Biography

The biological questions that have interested me since the beginning of my research career have mainly concerned gene expression and its specificities in plant mitochondria, a fascinating compartment of eukaryote cells, that uniquely combines prokaryote-like processes with features that appeared during eukaryote evolution.
During my PhD, in the laboratory of Axel Brennicke in Berlin and Ulm, I was able to perform the first gene expression analysis at the whole transcriptome level of a plant mitochondria, i.e. by determining the full extent of RNA editing activity. As a post-doctoral researcher, in Oxford, with C.J. Leaver, I broadened the scope of this research by focusing on the coordination of gene expression between mitochondria and the nucleus in Arabidopsis. This led to my recruitment at CNRS in 2003.
Since 2008, I have established my research team in Strasbourg and resumed the study of mitochondrial gene expression by becoming a specialist of pentatricopeptide repeat (PPR) proteins, some of the major players in post-transcriptional processes recently discovered at this time, which are 80 times more abundant in plants than in animals. The study of these proteins has been the main object of research carried out in my team in the past ten years. In particular, a major contribution has been to identify PPR proteins involved in RNase P activity, consisting in the 5’ maturation of tRNAs. These proteins that we called PRORP for "proteinaceous RNase P" are localized in both organelles and the nucleus and perform the endonucleolytic activity defining RNase P. We have determined that these proteins have completely replaced ribonucleoproteins (RNP) for RNase P activity in plants. Biophysical studies of PRORP / tRNA complexes suggest that PRORP proteins are structural mimics of RNP RNase P. This work answered the long-standing question on the nature of RNase P enzymes in plants and was a change of paradigm because it was previously accepted that RNase P activity would be universally carried by catalytic RNAs vestiges of the putative prebiotic RNA world.
More recently, my team has focused on mitochondrial translation, revealing that the plant mitochondrial ribosome is unique both in terms of structure and of protein content, with numerous PPR proteins occurring as core ribosomal proteins.

Activities

Employment (5)

Délégation Alsace: Strasbourg, FR

2024-01-01 to present | Director of IBMP (Institut de Biologie Moléculaire des Plantes)
Employment
Source: Self-asserted source
Philippe Giegé

CNRS Délégation Alsace: Strasbourg, Alsace, FR

2007-01-01 to present | Group leader (IBMP)
Employment
Source: Self-asserted source
Philippe Giegé

CNRS Délégation Alsace: Strasbourg, Alsace, FR

2018-01-01 to 2023-12-31 | IBMP-Deputy Director (Institut de Biologie Moléculaire des Plantes, IBMP-CNRS)
Employment
Source: Self-asserted source
Philippe Giegé

CNRS Délégation Alsace: Strasbourg, Alsace, FR

2003-01-01 to 2011 | CNRS researcher CR position (IBMP)
Employment
Source: Self-asserted source
Philippe Giegé

University of Oxford: Oxford, Oxfordshire, GB

2000 to 2003 | Post doc (with C.J. Leaver) (Plant Sciences)
Employment
Source: Self-asserted source
Philippe Giegé

Education and qualifications (3)

University of Strasbourg: Strasbourg, Alsace, FR

2007 to present | Habilitation to Direct Research
Qualification
Source: Self-asserted source
Philippe Giegé

University of Ulm: Ulm, DE

1996 to 2000 | PhD (Allgemeine Botanik)
Education
Source: Self-asserted source
Philippe Giegé

University of Strasbourg: Strasbourg, Alsace, FR

1995 to 1996 | Master (IBMP (with J.M. Grienenberger))
Education
Source: Self-asserted source
Philippe Giegé

Professional activities (3)

Comité National de la Recherche Scientifique: Paris, Île-de-France, FR

2016 to present | Elected senior member (section 23)
Service
Source: Self-asserted source
Philippe Giegé

University of Strasbourg: Strasbourg, Alsace, FR

2012 | Cercle Gutenberg prize (Cerche Gutenberg)
Distinction
Source: Self-asserted source
Philippe Giegé

Société Française de Physiologie Végétale: Paris, FR

2003 | Young scientist award
Distinction
Source: Self-asserted source
Philippe Giegé

Funding (5)

Protein-only RNase P as a central regulator of tRNA homeostasis in Arabidopsis nuclei – PROPHAN

2022-11-21 to 2026-11-20 | Grant
Agence Nationale de la Recherche (Paris, FR)
GRANT_NUMBER: ANR-22-CE12-0008
Source: Self-asserted source
Philippe Giegé via DimensionsWizard

Plant resistance to viruses induced by CytoRP, an RNase P-derived protein

2016-10-01 to 2020-09-30 | Grant
National Agency for Research (Paris, FR)
GRANT_NUMBER: ANR-16-CE21-0001
Source: Self-asserted source
Philippe Giegé via DimensionsWizard

Labex MitoCross

2012 to 2020 | Grant
Idex Unistra (Strasbourg, FR)
Source: Self-asserted source
Philippe Giegé

Structural and functional exploration of a novel family of proteins having RNase P activity

Grant
National Agency for Research (Paris, FR)
GRANT_NUMBER: ANR-11-BSV8-0008
Source: Self-asserted source
Philippe Giegé via DimensionsWizard

The subfamily of PPR336 : a possible role in plant mitochondrial translation.

Grant
National Agency for Research (Paris, FR)
GRANT_NUMBER: ANR-07-JCJC-0123
Source: Self-asserted source
Philippe Giegé via DimensionsWizard

Works (50 of 56)

Items per page:
Page 1 of 2

Discovery, structure, mechanisms, and evolution of protein-only RNase P enzymes.

The Journal of biological chemistry
2024-02 | Journal article
Contributors: Rossmanith W; Giegé P; Hartmann RK
Source: Self-asserted source
Philippe Giegé via Europe PubMed Central

A tRNA-modifying enzyme facilitates RNase P activity in Arabidopsis nuclei.

Nature plants
2023-11 | Journal article
Contributors: Arrivé M; Bruggeman M; Skaltsogiannis V; Coudray L; Quan YF; Schelcher C; Cognat V; Hammann P; Chicher J; Wolff P et al.
Source: Self-asserted source
Philippe Giegé via Europe PubMed Central

Types and Functions of Mitoribosome-Specific Ribosomal Proteins across Eukaryotes.

International journal of molecular sciences
2022-03 | Journal article
Contributors: Scaltsoyiannes V; Corre N; Waltz F; Giegé P
Source: Self-asserted source
Philippe Giegé via Europe PubMed Central

How to build a ribosome from RNA fragments in Chlamydomonas mitochondria.

Nature communications
2021-12 | Journal article
Contributors: Waltz F; Salinas-Giegé T; Englmeier R; Meichel H; Soufari H; Kuhn L; Pfeffer S; Förster F; Engel BD; Giegé P et al.
Source: Self-asserted source
Philippe Giegé via Europe PubMed Central

Purification and Cryo-electron Microscopy Analysis of Plant Mitochondrial Ribosomes.

Bio-protocol
2021-08 | Journal article
Contributors: Waltz F; Giegé P; Hashem Y
Source: Self-asserted source
Philippe Giegé via Europe PubMed Central

The Chlamydomonas mitochondrial ribosome: how to build a ribosome from RNA fragments

2021-05 | Preprint
Contributors: Waltz F; Salinas-Giegé T; Englmeier R; Meichel H; Soufari H; Kuhn L; Pfeffer S; Förster F; Engel BD; Giegé P et al.
Source: Self-asserted source
Philippe Giegé via Europe PubMed Central

Towards plant resistance to viruses using protein-only RNase P.

Nature communications
2021-02 | Journal article
Contributors: Gobert A; Quan Y; Arrivé M; Waltz F; Da Silva N; Jomat L; Cohen M; Jupin I; Giegé P
Source: Self-asserted source
Philippe Giegé via Europe PubMed Central

La Société de Biologie de Strasbourg : 100 ans au service de la science et de la société.

Biologie aujourd'hui
2020-12 | Journal article
Contributors: Antony P; Fournel S; Zoll J; Mantz JM; Befort K; Massotte D; Giégé P; Céraline J; Metzger D; Becker H et al.
Source: Self-asserted source
Philippe Giegé via Europe PubMed Central

Plant mitochondria use two pathways for the biogenesis of tRNA His.

Nucleic acids research
2020-09 | Journal article
Contributors: Placido A; Sieber F; Gobert A; Gallerani R; Giegé P; Maréchal-Drouard L
Source: Self-asserted source
Philippe Giegé via Europe PubMed Central

Synthetic biological circuit tested in spaceflight.

Life sciences in space research
2020-09 | Journal article
Contributors: Kitto RZ; Dhillon Y; Bevington J; Horne M; Giegé P; Drouard L; Heintz D; Villette C; Corre N; Arrivé M et al.
Source: Self-asserted source
Philippe Giegé via Europe PubMed Central

Cryo-EM structure of the RNA-rich plant mitochondrial ribosome.

Nature plants
2020-04 | Journal article
Contributors: Waltz F; Soufari H; Bochler A; Giegé P; Hashem Y
Source: Self-asserted source
Philippe Giegé via Europe PubMed Central

Specificities of the plant mitochondrial translation apparatus.

Mitochondrion
2020-04 | Journal article
Contributors: Waltz F; Corre N; Hashem Y; Giegé P
Source: Self-asserted source
Philippe Giegé via Europe PubMed Central

Striking Diversity of Mitochondria-Specific Translation Processes across Eukaryotes

Trends in Biochemical Sciences
2020-02 | Journal article
Part of ISSN: 0968-0004
Source: Self-asserted source
Philippe Giegé

Involvement of PIN-like domain nucleases in tRNA processing and translation regulation

IUBMB life
2019 | Journal article
Source: Self-asserted source
Philippe Giegé

IUBMB Life Special Issue on tRNA Biology

IUBMB life
2019 | Journal article
Source: Self-asserted source
Philippe Giegé

Small is big in Arabidopsis mitochondrial ribosome

Nature plants
2019 | Journal article
Source: Self-asserted source
Philippe Giegé

Cryo-EM structure of the RNA-rich plant mitochondrial ribosome

2019-09 | Preprint
Contributors: Waltz F; Soufari H; Bochler A; Giegé P; Hashem Y
Source: Self-asserted source
Philippe Giegé via Europe PubMed Central

Determination of protein-only RNase P interactome in Arabidopsis mitochondria and chloroplasts identifies a complex between PRORP1 and another NYN domain nuclease.

The Plant journal : for cell and molecular biology
2019-08 | Journal article
Contributors: Bouchoucha A; Waltz F; Bonnard G; Arrivé M; Hammann P; Kuhn L; Schelcher C; Zuber H; Gobert A; Giegé P
Source: Self-asserted source
Philippe Giegé via Europe PubMed Central

Biophysical analysis of Arabidopsis protein-only RNase P alone and in complex with tRNA provides a refined model of tRNA binding

The Journal of biological chemistry
2017 | Journal article
Source: Self-asserted source
Philippe Giegé

Mechanistic and Structural Studies of Protein-Only RNase P Compared to Ribonucleoproteins Reveal the Two Faces of the Same Enzymatic Activity

Biomolecules
2016 | Journal article
Source: Self-asserted source
Philippe Giegé

The Restorer-of-fertility-like 2 pentatricopeptide repeat protein and RNase P are required for the processing of mitochondrial orf291 RNA in Arabidopsis

The Plant journal : for cell and molecular biology
2016 | Journal article
Source: Self-asserted source
Philippe Giegé

Transfer RNA maturation in Chlamydomonas mitochondria, chloroplast and the nucleus by a single RNase P protein

The Plant journal : for cell and molecular biology
2016 | Journal article
Source: Self-asserted source
Philippe Giegé

Transfer RNA: From pioneering crystallographic studies to contemporary tRNA biology

Archives of biochemistry and biophysics
2016 | Journal article
Source: Self-asserted source
Philippe Giegé

Crystallization and crystallographic analysis of an Arabidopsis nuclear proteinaceous RNase P

Acta crystallographica. Section F, Structural biology communications
2015 | Journal article
Source: Self-asserted source
Philippe Giegé

Distribution of Ribonucleoprotein and Protein-Only RNase P in Eukarya

Molecular biology and evolution
2015 | Journal article
Source: Self-asserted source
Philippe Giegé

tRNA biology in mitochondria

International journal of molecular sciences
2015 | Journal article
Source: Self-asserted source
Philippe Giegé

Biogenesis of the oxidative phosphorylation machinery in plants. From gene expression to complex assembly

Frontiers in plant science
2014 | Journal article
Source: Self-asserted source
Philippe Giegé

Helical repeats modular proteins are major players for organelle gene expression

Biochimie
2014 | Journal article
Source: Self-asserted source
Philippe Giegé

RNA metabolism in plant mitochondria

Trends in plant science
2014 | Journal article
Source: Self-asserted source
Philippe Giegé

Pentatricopeptide repeat proteins: a set of modular RNA-specific binders massively used for organelle gene expression

RNA biology
2013 | Journal article
Source: Self-asserted source
Philippe Giegé

PlantRNA, a database for tRNAs of photosynthetic eukaryotes

Nucleic acids research
2013 | Journal article
Source: Self-asserted source
Philippe Giegé

PPR proteins shed a new light on RNase P biology

RNA biology
2013 | Journal article
Source: Self-asserted source
Philippe Giegé

Structural insights into protein-only RNase P complexed with tRNA

Nature communications
2013 | Journal article
Source: Self-asserted source
Philippe Giegé

Dual localized mitochondrial and nuclear proteins as gene expression regulators in plants?

Frontiers in plant science
2012 | Journal article
Source: Self-asserted source
Philippe Giegé

Mitochondrial Genome Evolution and the Emergence of PPR Proteins

Advances in botanical research
2012 | Journal article
Source: Self-asserted source
Philippe Giegé

PRORP proteins support RNase P activity in both organelles and the nucleus in Arabidopsis

Genes & development
2012 | Journal article
Source: Self-asserted source
Philippe Giegé

A PPR protein involved in regulating nuclear genes encoding mitochondrial proteins?

Plant signaling & behavior
2011 | Journal article
Source: Self-asserted source
Philippe Giegé

An Arabidopsis dual-localized pentatricopeptide repeat protein interacts with nuclear proteins involved in gene expression regulation

The Plant cell
2011 | Journal article
Source: Self-asserted source
Philippe Giegé

A single Arabidopsis organellar protein has RNase P activity

Nature structural & molecular biology
2010 | Journal article
Source: Self-asserted source
Philippe Giegé

Plant mitochondria use two pathways for the biogenesis of tRNAHis

Nucleic acids research
2010 | Journal article
Source: Self-asserted source
Philippe Giegé

Biochemical requirements for the maturation of mitochondrial c-type cytochromes

Biochimica et biophysica acta
2009 | Journal article
Source: Self-asserted source
Philippe Giegé

Cytochrome c biogenesis in mitochondria

Mitochondrion
2008 | Journal article
Source: Self-asserted source
Philippe Giegé

PPR336 is associated with polysomes in plant mitochondria

Journal of molecular biology
2008 | Journal article
Source: Self-asserted source
Philippe Giegé

The three mitochondrial encoded CcmF proteins form a complex that interacts with CCMH and c-type apocytochromes in Arabidopsis

The Journal of biological chemistry
2008 | Journal article
Source: Self-asserted source
Philippe Giegé

AtCCMA interacts with AtCcmB to form a novel mitochondrial ABC transporter involved in cytochrome c maturation in Arabidopsis

The Journal of biological chemistry
2007 | Journal article
Source: Self-asserted source
Philippe Giegé

Four paralogues of RPL12 are differentially associated to ribosome in plant mitochondria

Biochimie
2007 | Journal article
Source: Self-asserted source
Philippe Giegé

AtCCMH, an essential component of the c-type cytochrome maturation pathway in Arabidopsis mitochondria, interacts with apocytochrome c

Proceedings of the National Academy of Sciences of the United States of America
2005 | Journal article
Source: Self-asserted source
Philippe Giegé

Coordination of nuclear and mitochondrial genome expression during mitochondrial biogenesis in Arabidopsis

The Plant cell
2005 | Journal article
Source: Self-asserted source
Philippe Giegé

CcmF(C) involved in cytochrome c maturation is present in a large sized complex in wheat mitochondria

FEBS letters
2004 | Journal article
Source: Self-asserted source
Philippe Giegé

Enzymes of glycolysis are functionally associated with the mitochondrion in Arabidopsis cells

The Plant cell
2003 | Journal article
Source: Self-asserted source
Philippe Giegé
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Peer review (5 reviews for 3 publications/grants)

Review activity for Nature Catalysis. (1)
Review activity for Nature communications (2)
Review activity for Nature plants. (2)