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ResearcherID: JDM-2431-2023

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Works (17)

The next-generation sequencing—chess problem

NAR Genomics and Bioinformatics
2024-09-28 | Journal article
DOI: 10.1093/nargab/lqae144
Contributors: Leo Zeitler; Arach Goldar; Cyril Denby Wilkes; Julie Soutourina
Source: check_circle
Crossref

A genome-wide comprehensive analysis of nucleosome positioning in yeast

PLOS Computational Biology
2024-01-24 | Journal article
DOI: 10.1371/journal.pcbi.1011799
Contributors: Leo Zeitler; Shaun Mahony; Kévin André; Adriana Alberti; Cyril Denby Wilkes; Julie Soutourina; Arach Goldar
Source: check_circle
Crossref

Functional interplay between Mediator and RSC chromatin remodeling complex controls nucleosome-depleted region maintenance at promoters

Cell Reports
2023-05 | Journal article
DOI: 10.1016/j.celrep.2023.112465
Contributors: Kévin M. André; Nathalie Giordanengo Aiach; Veronica Martinez-Fernandez; Leo Zeitler; Adriana Alberti; Arach Goldar; Michel Werner; Cyril Denby Wilkes; Julie Soutourina
Source: check_circle
Crossref

A quantitative modelling approach for DNA repair on a population scale

PLOS Computational Biology
2022-09-12 | Journal article
DOI: 10.1371/journal.pcbi.1010488
Contributors: Leo Zeitler; Carl Herrmann; Cyril Denby Wilkes; Arach Goldar; Julie Soutourina
Source: check_circle
Crossref

Genomic analysis of Rad26 and Rad1-Rad10 reveals differences in their dependence on Mediator and RNA polymerase II.

Genome research
2022-06-23 | Journal article
DOI: 10.1101/gr.276371.121
PMID: 35738899
Contributors: Cyril DENBY WILKES
Source: Self-asserted source
Cyril DENBY WILKES

Microfluidic platform for monitoring <i>Saccharomyces cerevisiae</i> mutation accumulation.

Lab on a chip
2021-06-01 | Journal article
DOI: 10.1039/d1lc00086a
PMID: 33960358
Source: Self-asserted source
Cyril DENBY WILKES

Functional interplay between Mediator and RNA polymerase II in Rad2/XPG loading to the chromatin.

Nucleic acids research
2019-09-01 | Journal article
DOI: 10.1093/nar/gkz598
PMID: 31299084
PMC: PMC6753472
Source: Self-asserted source
Cyril DENBY WILKES

Glucocorticoids delay RAF-induced senescence promoted by EGR1.

Journal of cell science
2019-08-22 | Journal article
DOI: 10.1242/jcs.230748
PMID: 31371485
Source: Self-asserted source
Cyril DENBY WILKES

A mating-type mutagenesis screen identifies a zinc-finger protein required for specific DNA excision events in Paramecium.

Nucleic acids research
2018-10-01 | Journal article
DOI: 10.1093/nar/gky772
PMID: 30165457
PMC: PMC6182129
Source: Self-asserted source
Cyril DENBY WILKES

Six domesticated PiggyBac transposases together carry out programmed DNA elimination in <i>Paramecium</i>.

eLife
2018-09-18 | Journal article
DOI: 10.7554/elife.37927
PMID: 30223944
PMC: PMC6143343
Source: Self-asserted source
Cyril DENBY WILKES

A meiosis-specific Spt5 homolog involved in non-coding transcription.

Nucleic acids research
2017-05-01 | Journal article
DOI: 10.1093/nar/gkw1318
PMID: 28053118
PMC: PMC5416832
Source: Self-asserted source
Cyril DENBY WILKES

Flow cytometry sorting of nuclei enables the first global characterization of Paramecium germline DNA and transposable elements.

BMC genomics
2017-04-26 | Journal article
DOI: 10.1186/s12864-017-3713-7
PMID: 28446146
PMC: PMC5405496
Source: Self-asserted source
Cyril DENBY WILKES

ParTIES: a toolbox for Paramecium interspersed DNA elimination studies.

Bioinformatics (Oxford, England)
2015-11-20 | Journal article
DOI: 10.1093/bioinformatics/btv691
PMID: 26589276
Source: Self-asserted source
Cyril DENBY WILKES

TFIIS-Dependent Non-coding Transcription Regulates Developmental Genome Rearrangements.

PLoS genetics
2015-07-15 | Journal article
DOI: 10.1371/journal.pgen.1005383
PMID: 26177014
PMC: PMC4503560
Source: Self-asserted source
Cyril DENBY WILKES

Local effect of enhancer of zeste-like reveals cooperation of epigenetic and cis-acting determinants for zygotic genome rearrangements.

PLoS genetics
2014-09-25 | Journal article
DOI: 10.1371/journal.pgen.1004665
PMID: 25254958
PMC: PMC4177680
Source: Self-asserted source
Cyril DENBY WILKES

Genome-wide analysis of genetic and epigenetic control of programmed DNA deletion.

Nucleic acids research
2014-07-12 | Journal article
DOI: 10.1093/nar/gku619
PMID: 25016527
PMC: PMC4132734
Source: Self-asserted source
Cyril DENBY WILKES

The Paramecium germline genome provides a niche for intragenic parasitic DNA: evolutionary dynamics of internal eliminated sequences.

PLoS genetics
2012-10-04 | Journal article
DOI: 10.1371/journal.pgen.1002984
PMID: 23071448
PMC: PMC3464196
Source: Self-asserted source
Cyril DENBY WILKES
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