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Employment (1)

Consejo Superior de Investigaciones Científicas: Madrid, Madrid, ES

Científico Titular (Centro de Biología Molecular Severo Ochoa)
Employment
Source: Self-asserted source
Begoña Aguado

Education and qualifications (2)

University of Oxford: Oxford, Oxfordshire, GB

1998 | Doctorado (MRC Immunochemistry Unit)
Education
Source: Self-asserted source
Begoña Aguado

Universidad Autónoma de Madrid: Madrid, ES

1988 | Licenciatura (Bioquímica y Biología Molecular)
Qualification
Source: Self-asserted source
Begoña Aguado

Works (50 of 63)

Items per page:
Page 1 of 2

Searching for high pathogenicity avian influenza virus in Antarctica

Nature Microbiology
2024-11-20 | Journal article
Part of ISSN: 2058-5276
Contributors: Begoña Aguado; Lineke Begeman; Anne Günther; Matteo Iervolino; Florencia Soto; Ralph E. T. Vanstreels; Alice Reade; Adam Coerper; Ben Wallis; Antonio Alcamí et al.
Source: Self-asserted source
Begoña Aguado

A Proteogenomic Approach to Unravel New Proteins Encoded in the <i>Leishmania donovani</i> (HU3) Genome

Genes
2024-06 | Journal article | Author
Contributors: Javier Adán-Jiménez; Alejandro Sanchez-Salvador; Esperanza Morato; Jose Carlos Solana; Begoña Aguado; Jose M. Requena
Source: check_circle
Multidisciplinary Digital Publishing Institute

Datasets of Iso-Seq transcripts for decoding transcriptome complexity in four Leishmania species

Data in Brief
2024-02 | Journal article | Author
Part of ISSN: 2352-3409
Contributors: Sandra González de la Fuente; Jose M. Requena; Begoña Aguado
Source: Self-asserted source
Begoña Aguado

Refinement of <i>Leishmania donovani</i> Genome Annotations in the Light of Ribosome-Protected mRNAs Fragments (Ribo-Seq Data)

Genes
2023-08 | Journal article | Author
Contributors: Alejandro Sanchez-Salvador; Sandra González de la Fuente; Begoña Aguado; Phillip Yates; Jose M. Requena
Source: check_circle
Multidisciplinary Digital Publishing Institute

<i>Leishmania infantum</i> (JPCM5) Transcriptome, Gene Models and Resources for an Active Curation of Gene Annotations

Genes
2023-04 | Journal article | Author
Contributors: Esther Camacho; Sandra González de la Fuente; Jose Carlos Solana; Laura Tabera; Fernando Carrasco-Ramiro; Begoña Aguado; Jose M. Requena
Source: check_circle
Multidisciplinary Digital Publishing Institute

Assembly of a Large Collection of Maxicircle Sequences and Their Usefulness for <i>Leishmania</i> Taxonomy and Strain Typing

Genes
2022-06 | Journal article | Author
Contributors: Jose Carlos Solana; Carmen Chicharro; Emilia García; Begoña Aguado; Javier Moreno; Jose M. Requena
Source: check_circle
Multidisciplinary Digital Publishing Institute

The Astonishing Large Family of HSP40/DnaJ Proteins Existing in <i>Leishmania</i>

Genes
2022-04 | Journal article | Author
Contributors: Jose Carlos Solana; Lorena Bernardo; Javier Moreno; Begoña Aguado; Jose M. Requena
Source: check_circle
Multidisciplinary Digital Publishing Institute

ARAMIS: From systematic errors of NGS long reads to accurate assemblies

Briefings in Bioinformatics
2021-11-05 | Journal article
Part of ISSN: 1467-5463
Part of ISSN: 1477-4054
Source: Self-asserted source
Begoña Aguado

The first wave of the COVID-19 epidemic in Spain was associated with early introductions and fast spread of a dominating genetic variant.

Nature genetics
2021-09 | Journal article
Contributors: López MG; Chiner-Oms Á; García de Viedma D; Ruiz-Rodriguez P; Bracho MA; Cancino-Muñoz I; D'Auria G; de Marco G; García-González N; Goig GA et al.
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central

Gene Annotation and Transcriptome Delineation on a De Novo Genome Assembly for the Reference <i>Leishmania major</i> Friedlin Strain.

Genes
2021-08 | Journal article
Contributors: Camacho E; González-de la Fuente S; Solana JC; Rastrojo A; Carrasco-Ramiro F; Requena JM; Aguado B
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central

Variability of the Pr77 sequence of L1Tc retrotransposon among six T. cruzi strains belonging to different discrete typing units (DTUs).

Acta tropica
2021-07 | Journal article
Contributors: Gómez I; López MC; Rastrojo A; Lorenzo-Díaz F; Requena JM; Aguado B; Valladares B; Thomas MC
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central

Proteins interacting with <i>Leishmania major</i> PUF1: A proteomic dataset.

Data in brief
2020-11 | Journal article
Contributors: Sanchiz Á; López-García D; García-García C; Ozaez I; Aguado B; Requena JM
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central

The Experimental Proteome of Leishmania infantum Promastigote and Its Usefulness for Improving Gene Annotations.

Genes
2020-09 | Journal article
Contributors: Sanchiz Á; Morato E; Rastrojo A; Camacho E; González-de la Fuente SG; Marina A; Aguado B; Requena JM
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Liquid biopsy by NGS: Differential presence of exons (DPE) is related to metastatic potential in a colon-cancer model in the rat.

Translational oncology
2020-07 | Journal article
Contributors: García-Olmo DC; Peiró-Pastor R; Picazo MG; Olmedillas-López S; García-Arranz M; Aguado B; García-Olmo D
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Trypanosoma cruzi Ikiakarora (TcIII) Draft Genome Sequence.

Microbiology resource announcements
2020-07 | Journal article
Contributors: Gómez I; Rastrojo A; Lorenzo-Díaz F; Sánchez-Luque FJ; Macías F; Aguado B; Valladares B; Requena JM; López MC; Thomas MC
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Draft Genome Sequence of the Trypanosoma cruzi B. M. López Strain (TcIa), Isolated from a Colombian Patient.

Microbiology resource announcements
2020-04 | Journal article
Contributors: Gómez I; Rastrojo A; Sanchez-Luque FJ; Lorenzo-Díaz F; Macías F; Valladares B; Aguado B; Requena JM; López MC; Thomas MC
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Leishmania Mitochondrial Genomes: Maxicircle Structure and Heterogeneity of Minicircles.

Genes
2019-09 | Journal article
Contributors: Camacho E; Rastrojo A; Sanchiz Á; González-de la Fuente S; Aguado B; Requena JM
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Analysis by RNA-seq of transcriptomic changes elicited by heat shock in Leishmania major.

Scientific reports
2019-05 | Journal article
Contributors: Rastrojo A; Corvo L; Lombraña R; Solana JC; Aguado B; Requena JM
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Complete assembly of the Leishmania donovani (HU3 strain) genome and transcriptome annotation.

Scientific reports
2019-04 | Journal article
Contributors: Camacho E; González-de la Fuente S; Rastrojo A; Peiró-Pastor R; Solana JC; Tabera L; Gamarro F; Carrasco-Ramiro F; Requena JM; Aguado B
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Complete and de novo assembly of the Leishmania braziliensis (M2904) genome.

Memorias do Instituto Oswaldo Cruz
2018-12 | Journal article
Contributors: González-de la Fuente S; Camacho E; Peiró-Pastor R; Rastrojo A; Carrasco-Ramiro F; Aguado B; Requena JM
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Deep-Sequencing Analysis of the Dynamics of HIV-1 Quasiespecies in Naive Patients during a Short Exposure to Maraviroc.

Journal of virology
2018-05 | Journal article
Contributors: Cascajero A; Rastrojo A; Díez-Fuertes F; Hernández-Novoa B; Aguado B; Moreno S; Alcami J; Pérez-Olmeda M
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Genomic and transcriptomic alterations in Leishmania donovani lines experimentally resistant to antileishmanial drugs.

International journal for parasitology. Drugs and drug resistance
2018-04 | Journal article
Contributors: Rastrojo A; García-Hernández R; Vargas P; Camacho E; Corvo L; Imamura H; Dujardin JC; Castanys S; Aguado B; Gamarro F et al.
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Liquid biopsy by NGS: differential presence of exons (DPE) in cell-free DNA reveals different patterns in metastatic and nonmetastatic colorectal cancer.

Cancer medicine
2018-03 | Journal article
Contributors: Olmedillas-López S; García-Olmo DC; García-Arranz M; Peiró-Pastor R; Aguado B; García-Olmo D
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Resequencing of the Leishmania infantum (strain JPCM5) genome and de novo assembly into 36 contigs.

Scientific reports
2017-12 | Journal article
Contributors: González-de la Fuente S; Peiró-Pastor R; Rastrojo A; Moreno J; Carrasco-Ramiro F; Requena JM; Aguado B
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Human genomics projects and precision medicine.

Gene therapy
2017-08 | Journal article
Contributors: Carrasco-Ramiro F; Peiró-Pastor R; Aguado B
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

RNA-Seq Based Transcriptome Analysis of the Type I Interferon Host Response upon Vaccinia Virus Infection of Mouse Cells.

Journal of immunology research
2017-02 | Journal article
Contributors: Hernáez B; Alonso G; Alonso-Lobo JM; Rastrojo A; Fischer C; Sauer S; Aguado B; Alcamí A
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

ChimPipe: accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data.

BMC genomics
2017-01 | Journal article
Contributors: Rodríguez-Martín B; Palumbo E; Marco-Sola S; Griebel T; Ribeca P; Alonso G; Rastrojo A; Aguado B; Guigó R; Djebali S
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Dataset for distribution of SIDER2 elements in the Leishmania major genome and transcriptome.

Data in brief
2017-01 | Journal article
Contributors: Requena JM; Rastrojo A; Garde E; López MC; Thomas MC; Aguado B
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Identification of Fungal Species in Brain Tissue from Alzheimer's Disease by Next-Generation Sequencing.

Journal of Alzheimer's disease : JAD
2017-01 | Journal article
Contributors: Alonso R; Pisa D; Aguado B; Carrasco L
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Genomic cartography and proposal of nomenclature for the repeated, interspersed elements of the Leishmania major SIDER2 family and identification of SIDER2-containing transcripts.

Molecular and biochemical parasitology
2016-12 | Journal article
Contributors: Requena JM; Rastrojo A; Garde E; López MC; Thomas MC; Aguado B
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

ChimPipe: Accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data

2016-08 | Preprint
OTHER-ID:

PPR29462

Contributors: Rodríguez-Martín B; Palumbo E; Marco-Sola S; Griebel T; Ribeca P; Alonso G; Rastrojo A; Aguado B; Guigó R; Djebali S
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central

Resequencing and assembly of seven complex loci to improve the Leishmania major (Friedlin strain) reference genome.

Parasites & vectors
2016-02 | Journal article
Contributors: Alonso G; Rastrojo A; López-Pérez S; Requena JM; Aguado B
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

DC-SIGN(+) Macrophages Control the Induction of Transplantation Tolerance.

Immunity
2015-06 | Journal article
Contributors: Conde P; Rodriguez M; van der Touw W; Jimenez A; Burns M; Miller J; Brahmachary M; Chen HM; Boros P; Rausell-Palamos F et al.
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Global variability in gene expression and alternative splicing is modulated by mitochondrial content.

Genome research
2015-03 | Journal article
Contributors: Guantes R; Rastrojo A; Neves R; Lima A; Aguado B; Iborra FJ
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

The need for transparency and good practices in the qPCR literature.

Nature methods
2013-11 | Journal article
Contributors: Bustin SA; Benes V; Garson J; Hellemans J; Huggett J; Kubista M; Mueller R; Nolan T; Pfaffl MW; Shipley G et al.
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

The transcriptome of Leishmania major in the axenic promastigote stage: transcript annotation and relative expression levels by RNA-seq.

BMC genomics
2013-04 | Journal article
Contributors: Rastrojo A; Carrasco-Ramiro F; Martín D; Crespillo A; Reguera RM; Aguado B; Requena JM
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Intron retention and transcript chimerism conserved across mammals: Ly6g5b and Csnk2b-Ly6g5b as examples.

BMC genomics
2013-03 | Journal article
Contributors: Hernández-Torres F; Rastrojo A; Aguado B
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Complex tissue-specific patterns and distribution of multiple RAGE splice variants in different mammals.

Genome biology and evolution
2013-01 | Journal article
Contributors: López-Díez R; Rastrojo A; Villate O; Aguado B
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Expanded CTG repeats trigger miRNA alterations in Drosophila that are conserved in myotonic dystrophy type 1 patients.

Human molecular genetics
2012-11 | Journal article
Contributors: Fernandez-Costa JM; Garcia-Lopez A; Zuñiga S; Fernandez-Pedrosa V; Felipo-Benavent A; Mata M; Jaka O; Aiastui A; Hernandez-Torres F; Aguado B et al.
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

A FRET-based assay for characterization of alternative splicing events using peptide nucleic acid fluorescence in situ hybridization.

Nucleic acids research
2009-06 | Journal article
Contributors: Blanco AM; Rausell L; Aguado B; Perez-Alonso M; Artero R
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Differential splicing, disease and drug targets.

Infectious disorders drug targets
2008-12 | Journal article
Contributors: Villate O; Rastrojo A; López-Díez R; Hernández-Torres F; Aguado B
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Regulation of expression of two LY-6 family genes by intron retention and transcription induced chimerism.

BMC molecular biology
2008-09 | Journal article
Contributors: Calvanese V; Mallya M; Campbell RD; Aguado B
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Characterization of the five novel Ly-6 superfamily members encoded in the MHC, and detection of cells expressing their potential ligands.

Protein science : a publication of the Protein Society
2006-10 | Journal article
Contributors: Mallya M; Campbell RD; Aguado B
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

NKp30 (NCR3) is a pseudogene in 12 inbred and wild mouse strains, but an expressed gene in Mus caroli.

Molecular biology and evolution
2005-05 | Journal article
Contributors: Hollyoake M; Campbell RD; Aguado B
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

The cell surface receptor G6b, a member of the immunoglobulin superfamily, binds heparin.

FEBS letters
2005-04 | Journal article
Contributors: de Vet EC; Newland SA; Lyons PA; Aguado B; Campbell RD
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

A genome annotation-driven approach to cloning the human ORFeome.

Genome biology
2004 | Journal article
EID:

2-s2.0-19944431414

Part of ISBN:

14656914

Contributors: Collins, J.E.; Wright, C.L.; Edwards, C.A.; Davis, M.P.; Grinham, J.A.; Cole, C.G.; Goward, M.E.; Aguado, B.; Mallya, M.; Mokrab, Y. et al.
Source: Self-asserted source
Begoña Aguado via Scopus - Elsevier

A genome annotation-driven approach to cloning the human ORFeome.

Genome biology
2004-09 | Journal article
Contributors: Collins JE; Wright CL; Edwards CA; Davis MP; Grinham JA; Cole CG; Goward ME; Aguado B; Mallya M; Mokrab Y et al.
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central

Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse.

Genome research
2003-12 | Journal article
Contributors: Xie T; Rowen L; Aguado B; Ahearn ME; Madan A; Qin S; Campbell RD; Hood L
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Adaptor signalling proteins Grb2 and Grb7 are recruited by human G6f, a novel member of the immunoglobulin superfamily encoded in the MHC.

The Biochemical journal
2003-10 | Journal article
Contributors: De Vet EC; Aguado B; Campbell RD
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
grade
Preferred source (of 2)‎

Regulation of gene expression using intron 1 of the ly-6 gene superfamily

2003-06 | Patent
OTHER-ID:

AU2003277979

Contributors: MALLYA MEERA; CAMPBELL ROBERT DUNCAN; AGUADO BEGONA
Source: Self-asserted source
Begoña Aguado via Europe PubMed Central
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Peer review (1 review for 1 publication/grant)

Review activity for F1000Research. (1)