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Loop profile: 699939

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Employment (3)

Pattern Computer, Inc.: Redmond, Washington, US

2022-06-01 to present | Senior Bioinformatics and Systems Biology Scientist
Employment
Source: Self-asserted source
Angelica M. Walker

Oak Ridge National Laboratory: Oak Ridge, TN, US

2019-08-12 to 2022-05-31 | Graduate Researcher (Bioscience Division/Computational Biology)
Employment
Source: Self-asserted source
Angelica M. Walker

ORISE Undergraduate Researcher at ORNL: Oak Ridge, TN, US

2018-05-29 to 2018-08-03 (HERE)
Employment
Source: Self-asserted source
Angelica M. Walker

Education and qualifications (2)

The University of Tennessee Knoxville: Knoxville, TN, US

2019-08-01 to 2022-05-31 | Data Science and Engineering PhD (Bredesen Center)
Education
Source: Self-asserted source
Angelica M. Walker

Johns Hopkins University: Baltimore, MD, US

2015-08-27 to 2019-05-23 | Computer Science and Cellular and Molecular Biology (Whiting School of Engineering and Krieger School of Arts and Sciences)
Education
Source: Self-asserted source
Angelica M. Walker

Works (10)

Quantum biological insights into CRISPR-Cas9 sgRNA efficiency from explainable-AI driven feature engineering

Nucleic Acids Research
2023-10-27 | Journal article
DOI: 10.1093/nar/gkad736
Part of ISSN: 0305-1048
Part of ISSN: 1362-4962
Contributors: Jaclyn Noshay; Tyler Walker; William G Alexander; Dawn M Klingeman; Jonathon Romero; Angelica M Walker; Erica Prates; Carrie Eckert; Stephan Irle; David Kainer et al.
Source: Self-asserted source
Angelica M. Walker

Using iterative random forest to find geospatial environmental and Sociodemographic predictors of suicide attempts

Frontiers in Psychiatry
2023-08-01 | Journal article
DOI: 10.3389/fpsyt.2023.1178633
Part of ISSN: 1664-0640
Contributors: Mirko Pavicic; Angelica M. Walker; Kyle A. Sullivan; John Lagergren; Ashley Cliff; Jonathon Romero; Jared Streich; Michael R. Garvin; John Pestian; Benjamin McMahon et al.
Source: Self-asserted source
Angelica M. Walker

Identification of Novel, Replicable Genetic Risk Loci for Suicidal Thoughts and Behaviors Among US Military Veterans

JAMA Psychiatry
2023-02-01 | Journal article
DOI: 10.1001/jamapsychiatry.2022.3896
Part of ISSN: 2168-622X
Contributors: Nathan A. Kimbrel; Allison E. Ashley-Koch; Xue J. Qin; Jennifer H. Lindquist; Melanie E. Garrett; Michelle F. Dennis; Lauren P. Hair; Jennifer E. Huffman; Daniel A. Jacobson; Ravi K. Madduri et al.
Source: Self-asserted source
Angelica M. Walker

Evaluating the performance of random forest and iterative random forest based methods when applied to gene expression data

Computational and Structural Biotechnology Journal
2022 | Journal article
DOI: 10.1016/j.csbj.2022.06.037
Part of ISSN: 2001-0370
Contributors: Angelica M. Walker; Ashley Cliff; Jonathon Romero; Manesh B. Shah; Piet Jones; Joao Gabriel Felipe Machado Gazolla; Daniel A Jacobson; David Kainer
Source: Self-asserted source
Angelica M. Walker

Running Ensemble Workflows at Extreme Scale: Lessons Learned and Path Forward

2022 IEEE 18th International Conference on e-Science (e-Science)
2022-10 | Conference paper | Author
DOI: 10.1109/escience55777.2022.00042
Contributors: Kshitij Mehta; Ashley Cliff; Frederic Suter; Angelica M. Walker; Matthew Wolf; Daniel Jacobson; Scott Klasky
Source: Self-asserted source
Angelica M. Walker

Antiviral Strategies Against SARS-CoV-2: A Systems Biology Approach

SARS-CoV-2: Methods and Protocols
2022-05-14 | Book chapter
Contributors: Angelica M. Walker; Erica T. Prates; Michael R. Garvin; Piet Jones ; J. Izaak Miller; Kyle A. Sullivan; Ashley Cliff; Joao Gabriel Felipe Machado Gazolla; Manesh B. Shah; Matthew Lane et al.
Source: Self-asserted source
Angelica M. Walker

Reusability First: Toward FAIR Workflows

2021 IEEE International Conference on Cluster Computing (CLUSTER)
2021-09 | Conference paper
DOI: 10.1109/cluster48925.2021.00053
Contributors: Matthew Wolf; Jeremy Logan; Kshitij Mehta; Daniel Jacobson; Mikaela Cashman; Angelica M. Walker; Greg Eisenhauer; Patrick Widener; Ashley Cliff
Source: Self-asserted source
Angelica M. Walker

A mechanistic model and therapeutic interventions for COVID-19 involving a RAS-mediated bradykinin storm

eLife
2020-07-07 | Journal article
DOI: 10.7554/elife.59177
Part of ISSN: 2050-084X
Source: Self-asserted source
Angelica M. Walker

A High-Performance Computing Implementation of Iterative Random Forest for the Creation of Predictive Expression Networks

Genes
2019-12-02 | Journal article
DOI: 10.3390/genes10120996
Part of ISSN: 2073-4425
Source: Self-asserted source
Angelica M. Walker

Finding New Cell Wall Regulatory Genes in Populus trichocarpa Using Multiple Lines of Evidence

Frontiers in Plant Science
2019-10-08 | Journal article
DOI: 10.3389/fpls.2019.01249
Part of ISSN: 1664-462X
Source: Self-asserted source
Angelica M. Walker
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