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Employment (3)

Universiteit Utrecht: Utrecht, Utrecht, NL

2021-01-01 to present | Assistant Professor (Pharmacology)
Employment
Source: Self-asserted source
Alejandro Lopez-Rincon

UMC Utrecht: Utrecht, NL

2021-01-01 to present | Associate Professor (Julius Center)
Employment
Source: Self-asserted source
Alejandro Lopez-Rincon

Universiteit Utrecht: Utrecht, Utrecht, NL

2019-02-01 to present | Post-Doct (Pharmacology )
Employment
Source: Self-asserted source
Alejandro Lopez-Rincon

Professional activities (1)

RIKEN Brain Science Institute: Nagoya, JP

Invited position
Source: Self-asserted source
Alejandro Lopez-Rincon

Works (50 of 67)

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Page 1 of 2

Keeping pace in the age of innovation: The perspective of Dutch pharmaceutical science students on the position of machine learning training in an undergraduate curriculum

Currents in Pharmacy Teaching and Learning
2025-02 | Journal article
Part of ISSN: 1877-1297
Contributors: S. Kidwai; D. Rojas-Velazquez; A. Lopez-Rincon; A.D. Kraneveld; D.L. Oberski; I. Meijerman
Source: Self-asserted source
Alejandro Lopez-Rincon

Understanding Parkinson's: The microbiome and machine learning approach

Maturitas
2025-02 | Journal article
Part of ISSN: 0378-5122
Contributors: David Rojas-Velazquez; Sarah Kidwai; Ting Chia Liu; Mounim A. El-Yacoubi; Johan Garssen; Alberto Tonda; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon

A Machine-Learning Approach to Finding Gene Target Treatment Options for Long COVID

2025-02-13 | Preprint
Contributors: Alejandro Lopez-Rincon
Source: check_circle
Crossref

Biomarker Discovery and Disease Prediction in Autoimmune Disorders: Insights form a REFS-Based Approach

2024-10-16 | Conference paper
Contributors: Sita Newer; Michalina Kierszka; Dominika Tomczyk; Sarah Kidwai; David Rojas-Velazquez; Johan Garssen; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL

Machine Learning Analysis of Gut Microbiome Profiles in Infants from Different Feeding Practices

2024-10-16 | Conference paper
Contributors: Ting Chia Liu; Sarah Kidwai; David Rojas-Velazquez; Johan Garssen; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL

Machine Learning Reveals New Gene Functions in Viral Respiratory Infections

2024-10-16 | Conference paper
Contributors: Dominika Tomczyk; Michalina Kierszka; Sita Newer; Sarah Kidwai; David Rojas-Velazquez; Johan Garssen; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL

Pilot Study: Is Autism Spectrum Disorder Related with Formula?

2024-10-16 | Conference paper
Contributors: David Rojas-Velazquez; Ting Chia Liu; Sarah Kidwai; Johan Garssen; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL

Predicting Long COVID: A Machine Learning Approach to Identifying Genetic Biomarkers in COVID-19 Patients

2024-10-16 | Conference paper
Contributors: Michalina Kierszka; Dominika Tomczyk; Sita Newer; Sarah Kidwai; David Rojas-Velazquez; Johan Garssen; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL

Exploring Human Perception of AI-Generated Artworks

2024 IEEE International Symposium on Technology and Society (ISTAS)
2024-09-18 | Conference paper
Contributors: Y. Dianey Rueda-Arango; David Rojas-Velazquez; Aleksandra V. Gorelova; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon

Future Pandemics: AI-Designed Assays for Detecting Mpox, General and Clade 1b Specific

2024-08-22 | Preprint
Contributors: Lucero Mendoza-Maldonado; John MacSharry; Johan Garssen; Aletta D. Kraneveld; Alberto Tonda; Alejandro Lopez-Rincon
Source: check_circle
Crossref

Image Generation with Interactive Evolutionary System using Bayesian Optimization

2024 16th International Conference on Human System Interaction (HSI)
2024-07-08 | Conference paper
Contributors: Y. Dianey Rueda-Arango; David Rojas-Velazquez; Aleksandra V. Gorelova; Johan Garssen; Alberto Tonda; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon

Machine-Learning Analysis of mRNA: An Application to Inflammatory Bowel Disease

2024 16th International Conference on Human System Interaction (HSI)
2024-07-08 | Conference paper
Contributors: David Rojas-Velazquez; Sarah Kidwai; Luciënne de Vries; Péter Tözsér; Luis Oswaldo Valencia-Rosado; Johan Garssen; Alberto Tonda; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon

Keeping pace in the age of innovation: Dutch student perspectives on learning AI and the position of AI in the undergraduate pharmaceutical sciences curriculum

2024-03-07 | Conference paper
Contributors: Sarah Kidwai; David Rojas-Velazquez; Alejandro Lopez-Rincon; A.D.Kraneveld Kraneveld; Irma Meijerman
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL

To treat or not to treat: Predicting Asthma Patient' Responsiveness to Omalizumab Using Machine Learning

2024-01-26 | Other
Contributors: Sarah Kidwai; Pietro Barbiero; Irma Meijerman; Alberto Tonda; Paula Perez-Pardo; Pietro Lio’; A Maitland-van Der Zee; Daniel Oberski; A.D.Kraneveld Kraneveld; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL

Methodology for biomarker discovery with reproducibility in microbiome data using machine learning

BMC Bioinformatics
2024-01-15 | Journal article
Part of ISSN: 1471-2105
Contributors: David Rojas-Velazquez; Sarah Kidwai; Aletta D. Kraneveld; Alberto Tonda; Daniel Oberski; Johan Garssen; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon

A robust microbiome signature for autism spectrum disorder across different studies using machine learning

Scientific Reports
2024-01-08 | Journal article
Part of ISSN: 2045-2322
Contributors: Lucia N. Peralta-Marzal; David Rojas-Velazquez; Douwe Rigters; Naika Prince; Johan Garssen; Aletta D. Kraneveld; Paula Perez-Pardo; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon

Multi-objective Evolutionary Discretization of Gene Expression Profiles: Application to COVID-19 Severity Prediction

2023 | Book chapter
Contributors: David Rojas-Velazquez; Alberto Tonda; Itzel Rodriguez-Guerra; Aletta D. Kraneveld; Alejandro Lopez-Rincon
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Crossref
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Bayesian Optimization for the Inverse Problem in Electrocardiography

2023-12-05 | Conference paper
Contributors: Alejandro Lopez-Rincon; David Rojas-Velazquez; Johan Garssen; Sander van der Laan; Daniel Oberski; Alberto Tonda
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL
grade
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Using Bayesian Optimization to Calculate Conductivity in an Electrolytic Fluid for the Forward Problem in Electrocardiography

2023-12-01 | Conference paper
Contributors: David Rojas-Velazquez; Alberto Tonda; Johan Garssen; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL

A robust mRNA signature obtained via recursive ensemble feature selection predicts the responsiveness of omalizumab in moderate‐to‐severe asthma

Clinical and Translational Allergy
2023-11-17 | Journal article
Contributors: Sarah Kidwai; Pietro Barbiero; Irma Meijerman; Alberto Tonda; Paula Perez-Pardo; Pietro Lio ́; Anke van der Maitland-Zee; Daniel L Oberski; Aletta D Kraneveld; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL
grade
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An Innovative AI-based primer design tool for precise and accurate detection of SARS-CoV-2 variants of concern

Scientific Reports
2023-09 | Journal article
Contributors: Carmina Angelica Perez-Romero; Lucero Mendoza-Maldonado; Alberto Tonda; Etienne Coz; Patrick Tabeling; Jessica Vanhomwegen; John Macsharry; Joanna Szafran; Lucina Bobadilla-Morales; Alfredo Corona-Rivera et al.
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL
grade
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Dietary Influences on the Composition of Breast Milk Microbiome

2023-09-20 | Conference paper
Contributors: David Rojas-Velazquez; Sarah Kidwai; Marlet Martinez-Archundia; Daniel Oberski; Johan Garssen; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL

Personalizing IBD: The Search for Genetic Markers using Machine Learning

2023-09-20 | Conference paper
Contributors: Luciënne de Vries; Péter Tőzsér; Sarah Kidwai; Alejandro Lopez-Rincon; Johan Garssen; David Rojas-Velazquez
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL

Predicting IBD Patient Response to Infliximab Therapy Using Machine Learning

2023-09-20 | Conference paper
Contributors: Péter Tőzsér; Luciënne de Vries; David Rojas-Velazquez; Alejandro Lopez-Rincon; Johan Garssen; Sarah Kidwai
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL

16:10-16:20 A combination of immune cell types identified through ensemble machine learning strategy detects altered profile in recurrent pregnancy loss

Journal of Reproductive Immunology
2023-08 | Journal article
Part of ISSN: 0165-0378
Contributors: Marilen Benner; Dorien Feyaerts; Alejandro Lopez-Rincon; Olivier WH van der Heijden; Marie-Louise van der Hoorn; Irma Joosten; Gerben Ferwerda; Renate G van der Molen
Source: Self-asserted source
Alejandro Lopez-Rincon

Bi-Directional Interactions between Glucose-Lowering Medications and Gut Microbiome in Patients with Type 2 Diabetes Mellitus: A Systematic Review

Genes
2023-08-01 | Journal article
Part of ISSN: 2073-4425
Contributors: Ruolin Li; fereshteh shokri; Alejandro Rincon; Fernando Rivadeneira; Carolina Medina-Gomez; fariba ahmadizar
Source: Self-asserted source
Alejandro Lopez-Rincon

In vivo and ex vivo inflammatory responses of the esophageal mucosa to food challenge in adults with eosinophilic esophagitis

Allergy
2023-07 | Journal article
Part of ISSN: 0105-4538
Part of ISSN: 1398-9995
Contributors: Maria L. Haasnoot; Mirelle Kleuskens; Alejandro Lopez‐Rincon; Mara A. P. Diks; Ingrid Terreehorst; Jaap H. Akkerdaas; Ronald van Ree; Marleen T. J. van Ampting; Johan Garssen; Frank A. Redegeld et al.
Source: Self-asserted source
Alejandro Lopez-Rincon

FEATURE SELECTION APPLIED TO MICROBIOME FOR DRUG DISCOVERY

2023-05-03 | Conference paper
Contributors: David Rojas-Velazquez; Sarah Kidwai; Lara Cerezin; Luciënne de Vries; Kosta Besermenji; Paula Perez-Pardo; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL

USING MACHINE LEARNING FOR DRUG DISCOVERY IN IBD

2023-05-03 | Conference paper
Contributors: Sarah Kidwai; David Rojas-Velazquez; Dora Kožinec; Lukas Vaišvilas; Paula Perez-Pardo; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL

Predictive factors for allergy at 4–6 years of age based on machine learning: A pilot study

PharmaNutrition
2023-03 | Journal article
Part of ISSN: 2213-4344
Contributors: Kim Kamphorst; Alejandro Lopez-Rincon; Arine M. Vlieger; Johan Garssen; Esther van ’t Riet; Ruurd M. van Elburg
Source: Self-asserted source
Alejandro Lopez-Rincon

Classifying asthma control using salivary and fecal bacterial microbiome in children with moderate‐to‐severe asthma

Pediatric Allergy and Immunology
2023-02 | Journal article
Part of ISSN: 0905-6157
Part of ISSN: 1399-3038
Contributors: Jelle M. Blankestijn; Alejandro Lopez‐Rincon; Anne H. Neerincx; Susanne Vijverberg; Simone Hashimoto; Mario Gorenjak; Olaia Sardón Prado; Paula Corcuera‐Elosegui; Javier Korta‐Murua; Maria Pino‐Yanes et al.
Source: Self-asserted source
Alejandro Lopez-Rincon

In Silico Screening of Drugs That Target Different Forms of E Protein for Potential Treatment of COVID-19

Pharmaceuticals
2023-02-14 | Journal article
Part of ISSN: 1424-8247
Contributors: Gema Lizbeth Ramírez Salinas; Alejandro López Rincón; Jazmín García-Machorro; Jose Correa Basurto; MARLET MARTINEZ ARCHUNDIA
Source: Self-asserted source
Alejandro Lopez-Rincon

Analysing the protection from respiratory tract infections and allergic diseases early in life by human milk components: the PRIMA birth cohort

BMC Infectious Diseases
2022-12 | Journal article
Part of ISSN: 1471-2334
Contributors: Arthur H. van Stigt; Katrien Oude Rengerink; Kitty W. M. Bloemenkamp; Wouter de Waal; Sabine M. P. J. Prevaes; Thuy-My Le; Femke van Wijk; Maaike Nederend; Anneke H. Hellinga; Christianne S. Lammers et al.
Source: Self-asserted source
Alejandro Lopez-Rincon

Towards a reduced feature selection pipeline in 16s rRNA microbiome data using Machine Learning

2022-11-14 | Conference paper
Contributors: David Rojas-Velazquez; Sarah Kidwai; Paula Perez-Pardo; Daniel Oberski; Johan Garssen; Aletta D Kraneveld; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL

An evolutionary approach to the discretization of gene expression profiles to predict the severity of COVID-19

2022-07-09 | Conference paper
Contributors: Nisrine Mouhrim; Alberto Tonda; Itzel Rodríguez-Guerra; Aletta D Kraneveld; Alejandro Lopez Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL
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A combination of immune cell types identified through ensemble machine learning strategy detects altered profile in recurrent pregnancy loss: a pilot study

F&S Science
2022-05 | Journal article
Part of ISSN: 2666-335X
Contributors: Marilen Benner; Dorien Feyaerts; Alejandro Lopez-Rincon; Olivier van der Heijden; Marie-Louise van der Hoorn; Irma Joosten; Gerben Ferwerda; Renate van der Molen
Source: Self-asserted source
Alejandro Lopez-Rincon

Algorithmic music generation by harmony recombination with genetic algorithm

Journal of Intelligent & Fuzzy Systems
2022-03-31 | Journal article
Part of ISSN: 1064-1246
Part of ISSN: 1875-8967
Contributors: Omar Lopez-Rincon; Oleg Starostenko; Alejandro Lopez-Rincon
Source: Self-asserted source
Alejandro Lopez-Rincon

SARS-CoV-2 Omicron Variant AI-based Primers

2022-01-26 | Preprint
Contributors: Carmina A. Perez-Romero; Alberto Tonda; Lucero Mendoza-Maldonado; John MacSharry; Joanna Szafran; Eric Claassen; Johan Garssen; Aletta D. Kraneveld; Alejandro Lopez-Rincon
Source: check_circle
Crossref

Classification and specific primer design for accurate detection of SARS-CoV-2 using deep learning

Scientific reports
2021 | Journal article
Part of ISSN: 2045-2322
Source: Self-asserted source
Alejandro Lopez-Rincon
grade
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Recursive ensemble feature selection provides a robust mRNA expression signature for myalgic encephalomyelitis/chronic fatigue syndrome

Scientific reports
2021 | Journal article
Part of ISSN: 2045-2322
Source: Self-asserted source
Alejandro Lopez-Rincon
grade
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Dietary Supplementation throughout Life with Non-Digestible Oligosaccharides and/or n-3 Poly-Unsaturated Fatty Acids in Healthy Mice Modulates the Gut–Immune System–Brain Axis

Nutrients
2021-12-30 | Journal article
Part of ISSN: 2072-6643
Contributors: Kirsten Szklany; Phillip A. Engen; Ankur Naqib; Stefan Green; Ali Keshavarzian; Alejandro Lopez Rincon; Cynthia J Siebrand; Mara A. P. Diks; Melanie van de Kaa; johan garssen et al.
Source: Self-asserted source
Alejandro Lopez-Rincon
grade
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Antibiotic Intervention Affects Maternal Immunity During Gestation in Mice

Frontiers in Immunology
2021-08-26 | Journal article
Part of ISSN: 1664-3224
Contributors: Marilen Benner; Alejandro Lopez-Rincon; Suzan Thijssen; Johan Garssen; Gerben Ferwerda; Irma Joosten; Renate G. van der Molen; Astrid Hogenkamp
Source: Self-asserted source
Alejandro Lopez-Rincon

Design of specific primer sets for SARS-CoV-2 variants using evolutionary algorithms

2021-06-26 | Conference paper
Contributors: Alejandro Lopez Rincon; Carmina a Perez Romero; Lucero Mendoza Maldonado; Eric Claassen; Johan Garssen; Aletta D Kraneveld; Alberto Tonda
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL
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Modelling Asthma Patients’ Responsiveness to Treatment Using Feature Selection and Evolutionary Computation

2021-04-01 | Book chapter
Contributors: Alejandro Lopez-Rincon; Daphne S Roozendaal; Hilde M Spierenburg; Asta L Holm; Renee Metcalf; Paula Perez-Pardo; Aletta D Kraneveld; Alberto Tonda
Source: Self-asserted source
Alejandro Lopez-Rincon via HAL
grade
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Design of Specific Primer Sets for the Detection of SARS-CoV-2 Variants of Concern B.1.1.7, B.1.351, P.1, B.1.617.2 using Artificial Intelligence

2021-01-21 | Preprint
Contributors: Carmina A. Perez-Romero; Alberto Tonda; Lucero Mendoza-Maldonado; Etienne Coz; Patrick Tabeling; Jessica Vanhomwegen; Eric Claassen; Johan Garssen; Aletta D. Kraneveld; Alejandro Lopez-Rincon
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Crossref

Design of Specific Primer Set for Detection of B.1.1.7 SARS-CoV-2 Variant using Deep Learning

2020-12-29 | Preprint
Contributors: Alejandro Lopez-Rincon; Carmina A. Perez-Romero; Alberto Tonda; Lucero Mendoza-Maldonado; Eric Claassen; Johan Garssen; Aletta D. Kraneveld
Source: check_circle
Crossref

Batch correction of genomic data in chronic fatigue syndrome using CMA-ES

Proceedings of the 2020 Genetic and Evolutionary Computation Conference Companion
2020-07-08 | Conference paper
Source: Self-asserted source
Alejandro Lopez-Rincon
grade
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Machine Learning-Based Ensemble Recursive Feature Selection of Circulating miRNAs for Cancer Tumor Classification

Cancers
2020-07-03 | Journal article
Part of ISSN: 2072-6694
Source: Self-asserted source
Alejandro Lopez-Rincon
grade
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Classification and Specific Primer Design for Accurate Detection of SARS-CoV-2 Using Deep Learning

2020-03-14 | Preprint
Contributors: Alejandro Lopez-Rincon; Alberto Tonda; Lucero Mendoza-Maldonado; Daphne G.J.C. Mulders; Richard Molenkamp; Carmina A. Perez-Romero; Eric Claassen; Johan Garssen; Aletta D. Kraneveld
Source: check_circle
Crossref

Function Based Brain Modeling and Simulation of an Ischemic Region in Post-Stroke Patients using the Bidomain

Journal of Neuroscience Methods
2020-02 | Journal article
Part of ISSN: 0165-0270
Source: Self-asserted source
Alejandro Lopez-Rincon
grade
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Peer review (1 review for 1 publication/grant)

Review activity for PloS one. (1)