Personal information

AFM, STM, DFT, Molecular Electronics
Czech Republic

Activities

Employment (1)

FZU - Institute of Physics of the Czech Academy of Sciences: Praha, CZ

(Theory of condensed matter)
Employment
Source: Self-asserted source
Prokop Hapala

Education and qualifications (4)

Aalto-yliopisto: Aalto, FI

2018-06-02 to 2019-07-15 | post-doc (Applied physics)
Qualification
Source: Self-asserted source
Prokop Hapala

Univerzita Karlova v Praze Matematicko-fyzikální fakulta: Praha, CZ

2009-09-30 to 2016-09-12 | PhD (Physics of Condensed Matter and Materials Research)
Education
Source: Self-asserted source
Prokop Hapala

Institute of Chemical Technology: Prague, CZ

2007-09-30 to 2009-09-30 | Ing (Faculty of Chemical Engineering; Molecular Engineering)
Education
Source: Self-asserted source
Prokop Hapala

České Vysoké Učení Technické v Praze Fakulta Jaderná a Fyzikálně inženýrská: Praha, CZ

2004-09-30 to 2007-09-30 | Bc (Lasers and Optoelectronics)
Education
Source: Self-asserted source
Prokop Hapala

Works (42)

Engineering the Thermal and Energy-Storage Properties in Quantum Dots Using Dominant Faceting: The Case Study of Silicon

ACS Nano
2025-01-21 | Journal article
Contributors: Pavel Galář; Jakub Kopenec; Robert Král; Filip Matějka; Petra Zemenová; Milan Dopita; Prokop Hapala; Dirk König; Pavel Vrbka; Kateřina Kůsová
Source: check_circle
Crossref

Atomic force microscopy simulations for CO-functionalized tips with deep learning

Machine Learning: Science and Technology
2024-06-01 | Journal article
Contributors: Jaime Carracedo-Cosme; Prokop Hapala; Rubén Pérez
Source: check_circle
Crossref

Computational Design of Photosensitive Polymer Templates To Drive Molecular Nanofabrication

ACS Nano
2024-04-09 | Journal article
Contributors: Mithun Manikandan; Paolo Nicolini; Prokop Hapala
Source: check_circle
Crossref

Correction to Electrostatic Discovery Atomic Force Microscopy

ACS Nano
2022-09-27 | Journal article
Contributors: Niko Oinonen; Chen Xu; Benjamin Alldritt; Prokop Hapala; Filippo Federici Canova; Fedor Urtev; Shuning Cai; Ondřej Krejčí; Juho Kannala; Peter Liljeroth et al.
Source: check_circle
Crossref

Real Space Visualization of Entangled Excitonic States in Charged Molecular Assemblies

ACS Nano
2022-01-25 | Journal article
Contributors: Jiří Doležal; Sofia Canola; Prokop Hapala; Rodrigo Cezar de Campos Ferreira; Pablo Merino; Martin Švec
Source: check_circle
Crossref

Quantifying the evolution of atomic interaction of a complex surface with a functionalized atomic force microscopy tip

Scientific Reports
2020-08-24 | Journal article
Contributors: Alexander Liebig; Prokop Hapala; Alfred J. Weymouth; Franz J. Giessibl
Source: check_circle
Crossref

Electronic Structure Engineering Achieved via Organic Ligands in Silicon Nanocrystals

Chemistry of Materials
2020-08-11 | Journal article
Contributors: Kateřina Dohnalová; Prokop Hapala; Kateřina Kůsová; Ivan Infante
Source: check_circle
Crossref

Automated structure discovery in atomic force microscopy

Science Advances
2020-02-28 | Journal article
Contributors: Benjamin Alldritt; Prokop Hapala; Niko Oinonen; Fedor Urtev; Ondrej Krejci; Filippo Federici Canova; Juho Kannala; Fabian Schulz; Peter Liljeroth; Adam S. Foster
Source: check_circle
Crossref

Imaging charge distribution within molecules by scanning probe microscopy

Springer Series in Surface Sciences
2018 | Book
EID:

2-s2.0-85043786762

Contributors: Ondráček, M.; Hapala, P.; Švec, M.; Jelínek, P.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Iron-based trinuclear metal-organic nanostructures on a surface with local charge accumulation

Nature Communications
2018 | Journal article
EID:

2-s2.0-85051462108

Contributors: Krull, C.; Castelli, M.; Hapala, P.; Kumar, D.; Tadich, A.; Capsoni, M.; Edmonds, M.T.; Hellerstedt, J.; Burke, S.A.; Jelinek, P. et al.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Non-covalent control of spin-state in metal-organic complex by positioning on N-doped graphene

Nature Communications
2018 | Journal article
EID:

2-s2.0-85050598879

Contributors: de la Torre, B.; Švec, M.; Hapala, P.; Redondo, J.; Krejčí, O.; Lo, R.; Manna, D.; Sarmah, A.; Nachtigallová, D.; Tuček, J. et al.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Publisher Correction: The effect of hydration number on the interfacial transport of sodium ions (Nature, (2018), 557, 7707, (701-705), 10.1038/s41586-018-0122-2)

Nature
2018 | Journal article
EID:

2-s2.0-85055827016

Contributors: Peng, J.; Cao, D.; He, Z.; Guo, J.; Hapala, P.; Ma, R.; Cheng, B.; Chen, J.; Xie, W.J.; Li, X.-Z. et al.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Weakly perturbative imaging of interfacial water with submolecular resolution by atomic force microscopy

Nature Communications
2018-12 | Journal article
Part of ISSN: 2041-1723
Source: Self-asserted source
Prokop Hapala
grade
Preferred source (of 2)‎

The effect of hydration number on the interfacial transport of sodium ions

Nature
2018-05 | Journal article
Part of ISSN: 0028-0836
Part of ISSN: 1476-4687
Source: Self-asserted source
Prokop Hapala
grade
Preferred source (of 2)‎

Donor-Acceptor Properties of a Single-Molecule Altered by On-Surface Complex Formation

ACS Nano
2017 | Journal article
EID:

2-s2.0-85028470393

Contributors: Meier, T.; Pawlak, R.; Kawai, S.; Geng, Y.; Liu, X.; Decurtins, S.; Hapala, P.; Baratoff, A.; Liu, S.-X.; Jelínek, P. et al.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Principles and simulations of high-resolution STM imaging with a flexible tip apex

Physical Review B
2017 | Journal article
EID:

2-s2.0-85010809746

Contributors: Krejčí, O.; Hapala, P.; Ondráček, M.; Jelínek, P.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Submolecular Resolution by Variation of the Inelastic Electron Tunneling Spectroscopy Amplitude and its Relation to the AFM/STM Signal

Physical Review Letters
2017 | Journal article
EID:

2-s2.0-85031912552

Contributors: De La Torre, B.; Švec, M.; Foti, G.; Krejčí, O.; Hapala, P.; Garcia-Lekue, A.; Frederiksen, T.; Zbořil, R.; Arnau, A.; Vázquez, H. et al.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Band structure of silicon nanocrystals

Silicon Nanophotonics: Basic Principles, Present Status, and Perspectives: Second Edition
2016 | Book
EID:

2-s2.0-85009289934

Contributors: Kůsová, K.; Hapala, P.; Jelínek, P.; Pelant, I.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Characteristic Contrast in δf<inf>min</inf> Maps of Organic Molecules Using Atomic Force Microscopy

ACS Nano
2016 | Journal article
EID:

2-s2.0-84989170244

Contributors: Van Der Heijden, N.J.; Hapala, P.; Rombouts, J.A.; Van Der Lit, J.; Smith, D.; Mutombo, P.; Švec, M.; Jelinek, P.; Swart, I.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Charge-state dynamics in electrostatic force spectroscopy

Nanotechnology
2016 | Journal article
EID:

2-s2.0-84975037766

Contributors: Ondráček, M.; Hapala, P.; Jelínek, P.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Structural and Electronic Properties of Nitrogen-Doped Graphene

Physical Review Letters
2016 | Journal article
EID:

2-s2.0-84962730610

Contributors: Sforzini, J.; Hapala, P.; Franke, M.; Van Straaten, G.; Stöhr, A.; Link, S.; Soubatch, S.; Jelínek, P.; Lee, T.-L.; Starke, U. et al.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Study of ferrocene dicarboxylic acid on substrates of varying chemical activity

Journal of Physical Chemistry C
2016 | Journal article
EID:

2-s2.0-84989858108

Contributors: Berger, J.; Kośmider, K.; Stetsovych, O.; Vondráček, M.; Hapala, P.; Spadafora, E.J.; Švec, M.; Jelínek, P.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Submolecular Resolution Imaging of Molecules by Atomic Force Microscopy: The Influence of the Electrostatic Force

Physical Review Letters
2016 | Journal article
EID:

2-s2.0-84960540887

Contributors: Van Der Lit, J.; Di Cicco, F.; Hapala, P.; Jelinek, P.; Swart, I.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Tuning the conductance of benzene-based single-molecule junctions

Organic Electronics
2016 | Journal article
EID:

2-s2.0-84964878019

Contributors: Kamiński, W.; Topolnicki, R.; Hapala, P.; Jelínek, P.; Kucharczyk, R.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Mapping the electrostatic force field of single molecules from high-resolution scanning probe images

Nature Communications
2016-09 | Journal article
Part of ISSN: 2041-1723
Source: Self-asserted source
Prokop Hapala
grade
Preferred source (of 2)‎

Charge Redistribution and Transport in Molecular Contacts

Physical Review Letters
2015 | Journal article
EID:

2-s2.0-84943176311

Contributors: Corso, M.; Ondráček, M.; Lotze, C.; Hapala, P.; Franke, K.J.; Jelínek, P.; Pascual, J.I.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Chemical structure imaging of a single molecule by atomic force microscopy at room temperature

Nature Communications
2015 | Journal article
EID:

2-s2.0-84937395371

Contributors: Iwata, K.; Yamazaki, S.; Mutombo, P.; Hapala, P.; Ondráček, M.; Jelínek, P.; Sugimoto, Y.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Electronic and Chemical Properties of Donor, Acceptor Centers in Graphene

ACS Nano
2015 | Journal article
EID:

2-s2.0-84942288107

Contributors: Telychko, M.; Mutombo, P.; Merino, P.; Hapala, P.; Ondráček, M.; Bocquet, F.C.; Sforzini, J.; Stetsovych, O.; Vondráček, M.; Jelínek, P. et al.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Erratum: Origin of High-Resolution IETS-STM Images of Organic Molecules with Functionalized Tips (Physical Review Letters (2014) 113 (226101))

Physical Review Letters
2015 | Journal article
EID:

2-s2.0-84939497277

Contributors: Hapala, P.; Temirov, R.; Tautz, F.S.; Jelínek, P.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Photo-induced reactions from efficient molecular dynamics with electronic transitions using the FIREBALL local-orbital density functional theory formalism

Journal of Physics Condensed Matter
2015 | Journal article
EID:

2-s2.0-84928253940

Contributors: Zobač, V.; Lewis, J.P.; Abad, E.; Mendieta-Moreno, J.I.; Hapala, P.; Jelínek, P.; Ortega, J.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Simultaneous nc-afm/stm measurements with atomic resolution

NanoScience and Technology
2015 | Book
EID:

2-s2.0-84929995465

Contributors: Hapala, P.; Ondráček, M.; Stetsovych, O.; Švec, M.; Jelínek, P.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Achieving high-quality single-atom nitrogen doping of graphene/SiC(0001) by ion implantation and subsequent thermal stabilization

ACS Nano
2014 | Journal article
EID:

2-s2.0-84904765297

Contributors: Telychko, M.; Mutombo, P.; Ondráček, M.; Hapala, P.; Bocquet, F.C.; Kolorenč, J.; Vondráček, M.; Jelínek, P.; Švec, M.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Direct Bandgap Silicon: Tensile-Strained Silicon Nanocrystals

Advanced Materials Interfaces
2014 | Journal article
EID:

2-s2.0-84925085893

Contributors: Kůsová, K.; Hapala, P.; Valenta, J.; Jelínek, P.; Cibulka, O.; Ondič, L.; Pelant, I.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Silicene versus two-dimensional ordered silicide: Atomic and electronic structure of Si- (19 × 19)R23.4°/Pt(111)

Physical Review B - Condensed Matter and Materials Physics
2014 | Journal article
EID:

2-s2.0-84902149665

Contributors: Švec, M.; Hapala, P.; OndráAek, M.; Merino, P.; Blanco-Rey, M.; Mutombo, P.; VondráAek, M.; Polyak, Y.; Cháb, V.; Martín Gago, J.A. et al.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Origin of High-Resolution IETS-STM Images of Organic Molecules with Functionalized Tips

Physical Review Letters
2014-11-25 | Journal article
Part of ISSN: 0031-9007
Part of ISSN: 1079-7114
Source: Self-asserted source
Prokop Hapala
grade
Preferred source (of 2)‎

Mechanism of high-resolution STM/AFM imaging with functionalized tips

Physical Review B
2014-08-19 | Journal article
Part of ISSN: 1098-0121
Part of ISSN: 1550-235X
Source: Self-asserted source
Prokop Hapala
grade
Preferred source (of 2)‎

Calculation of non-adiabatic coupling vectors in a local-orbital basis set

Journal of Chemical Physics
2013 | Journal article
EID:

2-s2.0-84887385855

Contributors: Abad, E.; Lewis, J.P.; Zobač, V.; Hapala, P.; Jelínek, P.; Ortega, J.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Combined AFM and STM measurements of a silicene sheet grown on the Ag(111) surface

Journal of Physics Condensed Matter
2013 | Journal article
EID:

2-s2.0-84878070997

Contributors: Majzik, Z.; Rachid Tchalala, M.; Švec, M.; Hapala, P.; Enriquez, H.; Kara, A.; Mayne, A.J.; Dujardin, G.; Jelínek, P.; Oughaddou, H.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Theoretical analysis of electronic band structure of 2- to 3-nm Si nanocrystals

Physical Review B
2013-05-10 | Journal article
Part of ISSN: 1098-0121
Part of ISSN: 1550-235X
Source: Self-asserted source
Prokop Hapala
grade
Preferred source (of 2)‎

Interplay of conductance, force, and structural change in metallic point contacts

Physical Review Letters
2011 | Journal article
EID:

2-s2.0-78650977195

Contributors: Ternes, M.; González, C.; Lutz, C.P.; Hapala, P.; Giessibl, F.J.; Jelínek, P.; Heinrich, A.J.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Superior catalytic properties in aerobic oxidation of olefins over Au nanoparticles on pyrrolidone-modified SBA-15

Journal of Catalysis
2011 | Journal article
EID:

2-s2.0-79958146732

Contributors: Wang, L.; Wang, H.; Hapala, P.; Zhu, L.; Ren, L.; Meng, X.; Lewis, J.P.; Xiao, F.-S.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Recognition tunneling

Nanotechnology
2010 | Journal article
EID:

2-s2.0-77953490385

Contributors: Lindsay, S.; He, J.; Sankey, O.; Hapala, P.; Jelinek, P.; Zhang, P.; Chang, S.; Huang, S.
Source: Self-asserted source
Prokop Hapala via Scopus - Elsevier

Peer review (4 reviews for 3 publications/grants)

Review activity for ACS applied materials & interfaces. (1)
Review activity for Journal of physical chemistry. (2)
Review activity for Nature communications (1)